Pseudomonas rhizosphaerae: LT40_02050
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Entry
LT40_02050 CDS
T03339
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LT40_02050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prh02000
]
LT40_02050
Transporters [BR:
prh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LT40_02050
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GFIT
Motif
Pfam:
BPD_transp_1
DUF3290
Motif
Other DBs
NCBI-ProteinID:
AIS16245
UniProt:
A0A089YRA6
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Position
complement(437177..438022)
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AA seq
281 aa
AA seq
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MSRGYLLSAPALALFVALLIVPLGLTLVLSFNLFDYEVGVKSDSYTLANYASLLSDSYFY
EIFWRTFWISALVTFLCVVIGVPEAYILSRMGTPWRSIFLILILTPLLISVVVRAFGWSL
LLGADGLINQAIAALGGRPLKMLYTPFAVILALVHVMLPFMIIPVWTSLQKLDPAAEQAA
QSLGASQAKVMRMVVLPQIMPGVLSGTLIVFGLAASSFAIPGLLGGRRLKMVATVVYDQY
LSELNWPMGATIAVALLLANLLIMLSWNRLVEGRYKKALGE
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtggatacctgctttcggcgccggcgctggcgctgttcgtcgccctgctgatc
gtgccgctgggcctgacgctggtgctgtcgttcaacctgttcgactacgaagtgggggtc
aagagcgacagctacacgctggccaactacgccagcctactcagcgacagctacttttat
gaaattttctggcggaccttctggatcagtgcactggtgactttcctgtgcgtggtgatc
ggcgtaccggaggcttacattctcagccgcatgggtacaccgtggcgttcgatcttcctg
attctgatcctcacgccgctgctgatttcagtggtagtgcgtgccttcggctggagcctg
ctgctgggtgccgacgggctgatcaaccaggccatcgccgcgctgggcggacgcccgctg
aaaatgctctacacaccgttcgcggtgatcctggcactggtccacgtgatgttgccgttc
atgatcatcccggtctggacctcgctgcagaaactcgacccagccgccgagcaggccgcg
cagtcactgggcgcaagccaagcgaaggtgatgcgcatggtggtgctgccacagatcatg
cccggtgtgctgtcgggcacgctgatcgtcttcggcctggcggccagttcgttcgccatc
cccggcctgctcggcggccgacgcttgaagatggtcgccacggtggtctacgaccagtac
ctctcggaacttaactggcccatgggcgcgaccattgctgtggcgctgctgctggccaac
ctgctgatcatgctgtcctggaaccgcctggtcgaaggtcgctacaaaaaagccctgggg
gaatga
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