Pseudomonas rhizosphaerae: LT40_02205
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Entry
LT40_02205 CDS
T03339
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh03030
DNA replication
prh03430
Mismatch repair
prh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LT40_02205
03430 Mismatch repair
LT40_02205
03440 Homologous recombination
LT40_02205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prh03032
]
LT40_02205
03400 DNA repair and recombination proteins [BR:
prh03400
]
LT40_02205
Enzymes [BR:
prh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LT40_02205
DNA replication proteins [BR:
prh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LT40_02205
DNA repair and recombination proteins [BR:
prh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LT40_02205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AIS16273
UniProt:
A0A089YIR3
LinkDB
All DBs
Position
473017..473748
Genome browser
AA seq
243 aa
AA seq
DB search
MAVRSVVFDTETTGMPVTDGHRVIEIGCVELMGRRLTGRNFHVYVQPDRPSDEGAIGVHG
ITDEFLVGKPRFAEVADEFYEFIQGAQIIAHNATFDVGFLSNEFKIAGMPERANIAEYCT
VIDSLAMARERHPGQRNSLDALCKRYGIDNSGRELHGALLDSEILADVYLAMTGGQTSLS
LAGNASDGDGGGQQGSEIRRLPADRRQTTIIRASQAELDEHMARLQVIAKAAGADALWTQ
LGT
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggccgttcgttccgtagtattcgacaccgaaaccactggtatgccggtcaccgatggg
caccgcgtgatcgagatcggctgcgtcgaactgatggggcgccggctgaccgggcgcaac
ttccacgtctacgtgcagccggaccggcccagtgacgagggcgccattggcgtccacggc
atcactgatgagtttctggtgggcaagccacgcttcgccgaggttgccgacgagttctac
gagttcatccagggcgcgcagatcatcgcccacaacgcgaccttcgacgtcggcttcctg
agcaacgaattcaagatcgctggcatgcccgagcgggccaacatcgccgagtactgcacg
gtcatcgacagcctggcaatggcccgcgagcgccatccagggcaacgcaatagcctcgat
gcactgtgcaagcgctacggcatcgacaactccgggcgcgaactgcacggcgcgttgctc
gactccgagatcctcgccgacgtctacctagccatgaccggtggtcagaccagcctgtcg
ctggccggcaatgccagcgatggcgacggtggtggccagcagggcagcgagatccgtcgc
ctgcctgcggaccgtcggcagacgacgatcatccgcgccagccaagccgagctggacgag
cacatggcgcgcctgcaagtcatcgccaaagccgccggggccgatgcgctctggacgcaa
ctgggtacataa
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integrated database retrieval system
