Pseudomonas rhizosphaerae: LT40_02415
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Entry
LT40_02415 CDS
T03339
Name
(GenBank) ATPase AAA
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh02020
Two-component system
prh02025
Biofilm formation - Pseudomonas aeruginosa
prh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LT40_02415
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
LT40_02415
02025 Biofilm formation - Pseudomonas aeruginosa
LT40_02415
09142 Cell motility
02040 Flagellar assembly
LT40_02415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prh03000
]
LT40_02415
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
prh02035
]
LT40_02415
Transcription factors [BR:
prh03000
]
Prokaryotic type
Helix-turn-helix
Other families
LT40_02415
Bacterial motility proteins [BR:
prh02035
]
Flagellar system
Flagellar assembly proteins
Others
LT40_02415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_22
AAA_7
nSTAND3
bpMoxR
AAA_19
AAA
Motif
Other DBs
NCBI-ProteinID:
AIS16311
UniProt:
A0A089ZPQ9
LinkDB
All DBs
Position
534415..535896
Genome browser
AA seq
493 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEDNLACGSGDWQMSVDALSSSREVLCVLVGEV
ASGNLAGLLKTLANWDEFLPVLLLGEPGAVELPDDLRRRVLSHLEMPPSYSKLLDSLHRA
QVYREMYDQARERGRQREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGKE
VVARNLHYHSKRRDAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGGT
LFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSIDVRIIAATHKNLESMIEVGTFRE
DLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPGN
VRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQLVDSLRSDLEERVAINGHTPDF
ASSAMLPPEGLDLKDYLGGLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGMS
RREGEGEEQQAED
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctgctgatcgatgacgatagcgttcgccgccgggatctg
gcggtcatcctgaactttcttggcgaagacaacctggcctgcggcagcggcgactggcag
atgtcagtcgatgcgttgtcgtccagccgcgaggtgttgtgcgtcctggtaggggaggtt
gcatcgggcaatcttgccggcctgttgaagacgctcgccaactgggacgagttcctgccc
gtgcttctgctgggcgagccaggcgccgtcgagctgcccgacgacctgcggcgtcgcgtg
ttgtcccacttggagatgccacccagctacagcaagctgctcgattcgctgcaccgcgct
caggtctatcgcgagatgtacgaccaggcccgcgaacgcggccgtcagcgcgaacccaac
ctgttccgcagcctggtcggcaccagccgtgccatccagcatgtgcggcaaatgatgcag
caagtggccgataccgatgccagcgtgctcatccttggcgagtcgggtaccggcaaggaa
gtggtcgcgcgcaacctgcactaccattccaagcgtcgcgacgcgccgttcgtgccggtc
aactgcggcgccattccggccgagttgctcgaaagcgagctgttcggccacgagaaaggc
gccttcaccggggcgatcaccagtcgcgccgggcgttttgagctcgccaacggcggcacc
ctgttcctcgacgagatcggcgacatgccgctgccgatgcaggtcaagctgctgcgagtg
ttacaggaacggacattcgagcgcgtgggcagcaacaagactcaaagtattgacgtacgc
atcatcgctgctacccacaagaacctggaaagcatgatcgaggtcggcaccttccgtgaa
gacctgtactaccgcctgaacgtgttccccatcgagatggcgccgttgcgtgagcgggtg
gaagacattccgctgctgatgaacgagctgatctcgcgcatggagcatgagaagcgcggc
tcgatccgtttcaactcggcggccatcatgtcgctgtgtcgtcatggctggccgggcaac
gtgcgtgagctggccaacctggtcgagcgcatggcgatcatgcatccctatggcgtgatt
ggcgtggtcgagttgccgaagaaattccgctacgtggacgacgaagacgagcagttggtc
gacagcctgcgcagcgatctggaagagcgcgtggcaatcaacggccatacgcccgacttc
gcctccagcgccatgctgccgcccgaaggtcttgacctcaaggactacctgggcggcctg
gaacagggcctgatccaacaggcactggacgacgccaacggcatcgtcgcgcgcgctgcc
gaacgcctgcgcatccgccgtaccaccctggtggagaagatgcgcaagtacggcatgagc
cgccgcgaaggtgaaggcgaagagcaacaggcagaggattga
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