Pseudomonas rhizosphaerae: LT40_02645
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Entry
LT40_02645 CDS
T03339
Name
(GenBank) cytochrome C
KO
K02200
cytochrome c-type biogenesis protein CcmH
Organism
prh
Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
LT40_02645
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Gene cluster
GFIT
Motif
Pfam:
Ig_CycH
TPR_CcmH_CycH
TPR_2
TPR_19
TPR_16
TPR_14
TPR_1
TPR_7
ANAPC3
TPR_12
HEAT_Nup120
TPR_10
TPR_6
TPR_8
TPR_9
ARM_TT21_N
TPR_4
TPR_NUP120_160
Motif
Other DBs
NCBI-ProteinID:
AIS16357
UniProt:
A0A089YPR5
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Position
579388..580587
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AA seq
399 aa
AA seq
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MIDFWLAAGLLLLLALGFLLVPLLRARRTQPEKDRTALNVALYQERLAELNTQHAAGVLT
AAQLESGQAEAARELLADTEGGEVVTQTRLGRSIPLAAALLVPVLGLVLYLHYGASDRVE
LSREFAVPPTSVAQMTTRLEQAVQMQPEAVEGVYILGRTYMAQNRPAQAAELFERAAKLS
GRQPEVLGQWAQALYFAAGRQWSEQIQALTDEALLGDPKEATSLGLLGIAAFESKRFDKA
IGYWERLLATLPDKDPARAALQGGIERARGQLAADGKSPVSEPAPARTGLKVQVALAPAL
AAKVQPGDSVFVFARAVSGPPMPLAVKRLTVADLPAQVELADSDAMMPQLKLSNFPEVQL
IARISRAGQPTKGEWLARSAPIASDSAAVQHLMIDRPDP
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatttctggctcgccgccggcctgttgctgctgctcgccctgggtttcctgctg
gtaccgctgctgcgtgcccgtcgcacccagcccgaaaaggaccgcacggcgctcaacgtg
gcgctgtatcaagagcgcctggccgaactgaatacgcaacacgccgcaggcgtattgacg
gccgcgcaactggaaagcggccaagccgaggcggcccgcgagttgctggccgataccgaa
ggcggggaggtggtgacgcagacccgtctgggccgctcgatcccgttggcggcggcgctg
ctggtcccggtattgggcctggtgctctacctgcactatggcgccagcgatcgagtcgag
ctgagccgcgagttcgccgtaccgcccacgtccgtggcgcagatgaccacgcgcctcgaa
caggccgtgcagatgcagccggaagctgtcgagggcgtgtatatccttggtcgaacctac
atggcgcaaaaccggccggcgcaagcggcggaattgttcgagcgcgccgccaaactcagc
ggtcgccagccagaggtgctggggcaatgggcgcaggcgctgtatttcgccgcaggcagg
cagtggtccgaacagatccaggccctgactgatgaagccctgttgggcgatccaaaagag
gcgacgagtctaggcttgctgggcattgccgccttcgagagcaaacgcttcgacaaagcc
atcggctattgggagcgtttactggctaccttgccggacaaagaccctgcgcgcgctgcg
ctgcagggcggaatagaacgtgcccgtggccaactggccgctgatggcaagtcacctgtt
tccgagcccgctccggcacgcaccggattgaaagtgcaggtggctctggcacccgcgctg
gccgccaaggtgcagcctggcgacagcgtgttcgtcttcgcccgtgcggtgtccggccca
cccatgccgctggcggtcaagcgtctgacggtcgccgacctgccggcgcaagtcgagctg
gcagacagcgacgcgatgatgccgcagctgaaactgtcgaactttcccgaagtccaactc
atcgctcggatatccagggctggccagcccaccaagggtgaatggctggcgcgaagtgcg
ccgatcgccagcgacagcgccgccgtgcagcatttgatgatcgaccgtcccgacccgtag
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