Pseudomonas rhizosphaerae: LT40_03815
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Entry
LT40_03815 CDS
T03339
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
prh
Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prh03019
]
LT40_03815
Messenger RNA biogenesis [BR:
prh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LT40_03815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_29
AAA_22
SKI
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AIS16578
UniProt:
A0A089YJM0
LinkDB
All DBs
Position
complement(828158..829015)
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AA seq
285 aa
AA seq
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MRLIIVSGRSGSGKSTALDVLEDNGFYCIDNLPAGLLPELAERALIHTELAQPQVAVSID
ARNLPSHLSRFPQLLAEMRAKHIQCDVLYLDADEETLLKRFSETRRRHPLSNSNRSLAEA
IRVESDLLGPIVDLADLKINTTNLNLYQLRDAIKVRLLNKPEPGTAFLVESFGFKRGMPI
DADLVFDVRCLPNPYWKPELREQSGLDAPVAEYLAAQPDVEEMYQDIAAYLLKWLPRFAA
SSRAYVTIAIGCTGGHHRSVYLTERLGRLLQQSLKNVQVRHRDLS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgatcatcgtcagtggccgctcaggctcaggcaagagcactgccctggatgtt
ctggaagacaacggtttctattgcatcgacaacctgccagcagggctgttgcccgagctg
gccgagcgtgcgctgattcataccgagctggcgcaacctcaggtggccgtgtcgatcgat
gcgcgcaacctgcccagtcatctgtcacgcttcccgcagctactcgccgaaatgcgtgcc
aagcacatccaatgcgatgtcctgtacctggatgccgatgaagaaacgctgctcaagcgc
ttctccgagacccgacgtcgacaccctttgagcaacagcaatcgctcgctggccgaagcc
atccgggtggaaagcgacttgctggggcccatcgtcgatctggccgacctgaagatcaac
accaccaacctgaacctctaccagctgcgcgatgccatcaaggtccggctgttgaacaag
cccgagccgggcacggcctttctggtggaatcgttcggtttcaagcggggcatgccgata
gacgccgatctggtattcgacgttcgctgtctgcccaacccctactggaaacccgaactg
cgcgagcagtccgggcttgatgcgccagtcgccgaatacctggcagcgcagccggatgtc
gaagagatgtaccaggacatcgctgcctacctgctcaaatggctgccgcgcttcgcggcc
agcagccgtgcctatgtcaccatcgccattgggtgtacaggcgggcaccatcgctcggta
tacttgaccgagcgcctgggccgattgctgcagcagtcgctcaagaatgtccaggttcgc
caccgcgacctcagctga
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