Pseudomonas rhizosphaerae: LT40_03830 Help Entry LT40_03830        CDS       T03339                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism prh  Pseudomonas rhizosphaerae Pathway prh02020   Two-component system prh02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:prh00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     LT40_03830  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     LT40_03830  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:prh03021]     LT40_03830 Transcription machinery [BR:prh03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      LT40_03830 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID DUF4741 HTH_IclR RRP4_S1 HTH_21 Motif Other DBs NCBI-ProteinID:  AIS16581 UniProt:  A0A089ZPW3 LinkDB All DBs Position complement(829882..831375) Genome browser AA seq 497 aa AA seqDB search MKPSLVLRMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEEGDDFDNSD PLADNIEQKPTQEIQEPSFQESAPTVDNLEEGDWNERIPSELPVDTAWEDVYQTSASSLP SNDDEEWDFTTRTSVGESLQTHLLWQLNLAPMSDTDRLIAVTIIDCINNQGYLDETLQEI CESFDPELDIELDEIEAVLHRIQQFEPAGIGARNLSECLMLQLRQLPPKTRWLAEAQRLV SDYIDLLGSRDYSQLMRRMKLKEDELRQVIELVQSLNPRPGSQIESSEPEYVVPDVIVRK DNDRWLVELNQESVPRLRVNAQYAGFVRRADTSADNTFMRNQLQEARWFIKSLQSRNETL MKVATQIVEHQRGFLDYGDEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRGIYELK YFFSSHVSTSEGGECSSTAIRAIIKKLVAAENQKKPLSDSKIAGLLEAQGIQVARRTVAK YRESLGIAPSSERKRLM NT seq 1494 nt NT seq  +upstreamnt  +downstreamnt atgaaaccatcgctcgtcctacgtatgggccagcaactgacgatgacaccgcagttgcaa caggccatccgccttctccagctatcgaccctggacctccaacaggaaattcaggaagcg ctggaatccaatcccatgctcgaacgccaggaagaaggcgacgacttcgacaacagtgac ccgctggccgacaacatcgagcaaaagccgacccaggaaatccaggaaccgagctttcag gagtctgcgccgacggtggacaacctcgaggaaggcgattggaacgagcgcatccccagc gaactgcccgtcgacacggcgtgggaagacgtctaccagaccagcgccagcagcctgccg agcaacgatgacgaggagtgggacttcaccacccgcacatcggtcggcgaaagcctgcaa acccacctgttgtggcagctgaacctggcgcccatgtccgacaccgaccgcctgatcgcc gtgaccatcatcgattgcatcaacaatcagggctacctggacgagacgttgcaggaaatc tgcgaatcgttcgaccccgagcttgacatcgagctggacgaaatcgaagcggtgcttcat cgcatccagcagttcgagccggccggcatcggcgcgcgcaacctgagcgaatgcctgatg ctgcaactgcgccagctaccgcccaagacccgctggctggccgaggcgcagcgcttggtg agcgattacatcgacctgctggggtcgcgcgactacagccagttgatgcgccgcatgaag ctcaaggaagacgaactgcgccaggtcatcgagctggtacagagcctgaatccgcggccc ggctcgcagatcgaatccagcgaaccggaatacgtcgtgcccgacgtcatcgtgcgcaag gacaacgatcgctggctggtcgagctcaatcaggagtcggtcccgcgcctgcgagtcaat gcgcaatacgcaggcttcgtgcgacgcgccgacaccagcgccgacaacaccttcatgcgc aaccagctgcaggaggcgcgctggttcatcaagagcttgcagagccgcaacgagaccttg atgaaggtggccacgcagatcgtcgagcatcagcgcggtttcctcgattacggcgacgag gccatgaagcccttggtgctgcacgacatcgccgaggcggtgggcatgcacgagtcgacc atttcgcgggtgaccacgcagaaatacatgcacaccccccgtggcatctacgagctgaaa tactttttctcaagccacgtcagcacttccgaaggcggcgaatgctcgtccacggcgatt cgcgcgatcatcaagaaactggtcgccgccgaaaatcagaaaaagccgttgagtgacagc aagatcgctggtttactggaggcacaaggcatccaggtagcccgccgaacggtcgccaag tatcgcgaatccctagggattgcgccgtccagcgaacgcaagcggttgatgtag

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