Pseudomonas rhizosphaerae: LT40_04090
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Entry
LT40_04090 CDS
T03339
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh00470
D-Amino acid metabolism
prh00550
Peptidoglycan biosynthesis
prh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LT40_04090 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LT40_04090 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prh01011
]
LT40_04090 (murD)
Enzymes [BR:
prh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LT40_04090 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
prh01011
]
Precursor biosynthesis
Amino acid ligase
LT40_04090 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AIS16630
UniProt:
A0A089YSF6
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Position
882933..884279
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AA seq
448 aa
AA seq
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MSLIASSHFRIVVGLGKSGMSLVRFLARQGVAFAVADTREAPPELATLRRDYPQVEVRCG
ELDVEFLCRADELYVSPGLALATPALQQAAARGVQLSGDIDLFARHAKAPIVAITGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGQPALDLLDDDVELYVLELSSFQLETTHQLNAEVAT
VLNVSEDHMDRYSGLPSYHLAKHRIFRGARKVVFNRQDALSRPLIGEGMPCWTFGLNKPD
FKAFGLREEGGQKYLAYEFENLMPVGELKVRGAHNQANALAALALGHAVGLPFDAMLASL
RQFTGLAHRCQWLRERDGVAWYDDSKATNVGAAIAAIEGLGADIEGQLVLIAGGDGKGAD
FTALGQPIQRHCRALVLLGRDAARIAAVAGPDVAQVNVASIEEAVQRCAELAQPGDAVLL
SPACASLDMFKNYEERGRLFAHAVEGLS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtctctgatcgcttcttcccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggtgcgcttcctggcgcgccagggcgtggcgtttgccgtggccgacacgcgcgaa
gcgccgccggaactggcaacgctgcgtcgtgactaccctcaggtagaagtgcgctgcggt
gagctggacgtcgagtttctgtgccgcgccgacgaactctacgtgagccccggcctggcg
ctggcgacgcctgccttgcaacaggcagcggcccgcggcgtgcagttgtccggcgatatc
gacctgttcgcccgtcatgccaaggcgccgatcgtggcgattactggttccaacgccaaa
agcaccgtgaccacgctggtgggcgagatggcagcggcggcgggcaagcgcgtggcggtg
ggtggcaacctggggcaaccggcactcgatctgctcgacgacgacgtcgagctgtacgtg
ctggaactgtcgagctttcagctggaaaccacccatcagctcaatgccgaagtggccacg
gtgctcaacgtcagcgaagaccacatggaccgctacagcgggctgccgtcctaccacctg
gccaagcaccggatcttccggggtgcgcgcaaggtggtgttcaatcgccaggatgccttg
agccggccgttgatcggcgagggcatgccgtgctggacgttcggtctcaacaaaccggat
ttcaaggcgttcggcctccgcgaggaaggcgggcagaagtatctcgcttacgaattcgag
aatctgatgccggtcggtgagctcaaggtgcgcggcgcgcacaatcaggccaatgcctta
gccgcccttgccctggggcatgcggtcggtctgccgttcgatgccatgctggccagcctg
cgccaattcaccggtctggcgcaccgttgccagtggctgcgcgagcgtgacggcgtggcc
tggtacgacgattccaaggccaccaacgtcggtgctgcgattgccgccatcgaagggttg
ggcgccgacatcgaaggccagctcgtgctgatcgccggtggcgacggcaagggcgcggat
ttcacggcgctcggccagcccatccagcgccattgccgagcgctggtgctgctgggccgc
gatgctgcacggatcgccgccgttgccgggccggatgttgcccaggttaacgtggcctcg
atcgaggaagcggttcagcgctgtgccgaactggcgcagcccggcgatgccgtgctgctc
tcgccggcctgtgcgagcctggacatgttcaagaattacgaagaacgcgggcgcctgttc
gcccatgcagtagagggcttgtcatga
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