Pseudomonas rhizosphaerae: LT40_04205
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Entry
LT40_04205 CDS
T03339
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LT40_04205 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prh03019
]
LT40_04205 (groEL)
03110 Chaperones and folding catalysts [BR:
prh03110
]
LT40_04205 (groEL)
03029 Mitochondrial biogenesis [BR:
prh03029
]
LT40_04205 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prh04147
]
LT40_04205 (groEL)
Enzymes [BR:
prh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LT40_04205 (groEL)
Messenger RNA biogenesis [BR:
prh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LT40_04205 (groEL)
Chaperones and folding catalysts [BR:
prh03110
]
Heat shock proteins
HSP60 / Chaperonin
LT40_04205 (groEL)
Mitochondrial biogenesis [BR:
prh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LT40_04205 (groEL)
Exosome [BR:
prh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LT40_04205 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
LT40_04205 (groEL)
Exosomal proteins of breast cancer cells
LT40_04205 (groEL)
Exosomal proteins of colorectal cancer cells
LT40_04205 (groEL)
Exosomal proteins of bladder cancer cells
LT40_04205 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AIS16653
UniProt:
A0A089YJT7
LinkDB
All DBs
Position
909260..910906
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVKFGDSARKKMLTGVNVLADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEI
ELEDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQAIVNEGYKAVAAGMNPMDLKRGI
DKATIAVVAELKNLSKPCADTKAIAQVGTISANSDSSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPETMVAELDSPLILLVDKKISNIREMLPVLEAV
AKAGRPLLIVSEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKSMLQDIAVLTGGTV
ISEEIGLSLESATLENLGSAKRVTISKENTIIVDGAGVEGDIQSRINQIRTQVGETSSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RALEALTNLTGDNADQNVGIAVLRRAVEAPLRQIAANSGDEPSVVVNEVKNGNGNYGYNA
ATGVYGDMIEMGILDPTKVTRSALQAAASIGGLILTTEAAIADKPKAEGAAGGGMPDMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgactccgcccgcaagaaaatgctcactggtgtc
aacgttctggctgacgccgtcaaggcgaccctgggcccgaaaggccgtaacgtgatcatc
gagaagagcttcggcgctccgactatcaccaaggacggcgtttccgttgccaaggaaatc
gagctcgaagaccgtttcgaaaacatgggcgcgcagctggtcaaagacgttgcctcccgt
gccaacgatgacgcaggcgacggcaccaccaccgctaccgttctggctcaggcaattgtc
aacgaaggctacaaggccgtcgctgctggcatgaacccgatggacctcaagcgcggcatc
gacaaggcaaccatcgccgttgtcgctgagctgaaaaacctgtccaagccatgtgccgat
accaaggccatcgctcaggtcggtaccatctccgccaactccgacagctcgatcggcgac
atcattgccgaagccatggagaaggtcggtaaagaaggcgtgatcaccgtcgaagaaggt
tcgggtctggaaaacgaactgtcggtcgtcgaaggtatgcagttcgaccgcggctacctg
tccccgtacttcgtcaacaagcctgaaaccatggtcgccgagctggacagcccgctgatc
ctgctggtcgacaagaagatctccaacatccgcgaaatgctgccggtgctggaagctgtc
gccaaggctggccgtccgctgctgatcgtttccgaagacgtcgaaggcgaagccttggcg
acgctggtcgtgaacaacatgcgcggtatcgtcaaagtcgccgccgtcaaggcgccgggc
ttcggcgaccgtcgcaagtccatgctgcaggacatcgcagtactgaccggcggcaccgtc
atctccgaagagatcggcctgagcttggaaagtgccaccctggagaacctgggcagcgcc
aagcgcgtgaccatctccaaggaaaacaccatcatcgttgacggtgctggcgttgaaggc
gacatccagtcccgtatcaaccagatccgtacccaggttggcgaaacttcctcggactac
gaccgtgaaaaactgcaggaacgtctggccaagctgtctggcggcgttgcagtgatcaag
gtcggcgctggctccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgcaacccgcgcagccgtcgaagaaggcgtggtacctggcggtggcgttgcgctgatc
cgtgctctggaagcgctgaccaacctgaccggcgacaacgccgaccagaacgtcggtata
gcggtactgcgtcgtgcagtcgaagcaccgctgcgccagatcgctgccaactccggcgac
gagccaagcgttgtggtcaacgaagtcaagaacggcaacggtaactacggttacaatgct
gcaaccggcgtctacggcgacatgatcgaaatgggtatcctggaccctaccaaggtgacc
cgttcggcattgcaggcagcagcttccatcggtggtctgatcctgacgaccgaagcagcc
attgccgacaagccgaaagccgaaggcgcggctggcggcggcatgccagacatgggcggc
atgggtggcatgggcggcatgatgtaa
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