Pseudomonas rhizosphaerae: LT40_04590
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Entry
LT40_04590 CDS
T03339
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LT40_04590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prh03400
]
LT40_04590
Enzymes [BR:
prh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LT40_04590
DNA repair and recombination proteins [BR:
prh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LT40_04590
Prokaryotic type
LT40_04590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIS16728
UniProt:
A0A089YK10
LinkDB
All DBs
Position
994514..995200
Genome browser
AA seq
228 aa
AA seq
DB search
MTAEDRIKLEPSWKAALREEFDKPYMAQLREFLREEHAQGKEIYPPGPMIFNALNTTPLD
QVKVVILGQDPYHGPGQAHGLCFSVQPGIPTPPSLVNIYKELKRDLNIDIPNHGYLQSWA
EQGVLLLNTTMTVERANAASHAKKGWQPFTDRIIEVVSEQQSSVVFMLWGAHAQSKQKLI
DTSKHLVLTSVHPSPLSAHKGFIGNGHFSRANKFLEQNGKTAIDWRLP
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagaagaccgcatcaaactcgagcctagctggaaagctgcactgcgtgaggaa
ttcgacaagccctacatggcgcagttgcgcgaattcctgcgtgaagaacatgcgcagggc
aaagagatctatccgcccgggccaatgattttcaacgcactgaacaccacgccgctggat
caggtgaaagtcgtcatcctcggtcaggatccctatcacggtccgggccaggcccacggc
ctgtgcttttcggtacagccgggcatccctacgccgccgtcgctggtgaacatctacaag
gagctcaagcgcgacctgaacatcgacattcccaaccatggctatctgcagagctgggcg
gagcagggcgtgttgctgctcaacaccaccatgaccgtggagagggcgaatgcggcctca
cacgccaagaaaggctggcagccgttcaccgaccgcatcatcgaagtggtcagcgagcaa
cagtccagcgtggtgttcatgctgtggggcgcccatgcgcaaagcaagcagaagctgatc
gacaccagtaagcacctggtgctgacgtccgtacacccgtcgccgttgtcggcgcacaaa
ggcttcatcggcaacggccatttcagccgcgccaacaagtttctcgaacagaacggcaag
acggccatcgactggcgcctgccctag
DBGET
integrated database retrieval system
