Pseudomonas rhizosphaerae: LT40_05000
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Entry
LT40_05000 CDS
T03339
Symbol
ruvB
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LT40_05000 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prh03400
]
LT40_05000 (ruvB)
Enzymes [BR:
prh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LT40_05000 (ruvB)
DNA repair and recombination proteins [BR:
prh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LT40_05000 (ruvB)
RecFOR pathway proteins
LT40_05000 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
AAA_16
TIP49
AAA_14
nSTAND3
AAA_17
RNA_helicase
AAA_2
Rad17
ABC_tran
AAA_28
AAA_18
NTPase_1
NB-ARC
AAA_24
TsaE
RsgA_GTPase
NACHT
NPHP3_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIS16807
UniProt:
A0A089YQZ6
LinkDB
All DBs
Position
1094848..1095903
Genome browser
AA seq
351 aa
AA seq
DB search
MIEADRLIAATGRDREEVQDRAIRPLSLADYIGQPTVREQMELFIQAARGRSESLDHTLI
FGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRLSP
IVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQR
LEFYSTADLATIVSRSGNILGLAIEDEGAFEIARRARGTPRIANRLLRRVRDFAQVRGKG
HITKPIADLALNMLDVDERGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIEDV
LEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPNRLGDMPTGDAMPDEIDP
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaagccgaccgcctgatcgccgccaccggccgcgatcgagaagaagtacaggat
cgggccattcgcccgctcagcctggccgactacataggccagcccaccgtgcgcgagcag
atggagttgttcatccaggccgcgcgcgggcgcagcgaatctctggaccataccctgata
ttcggcccgccagggctgggcaagacgaccctggccaacatcatcgcccaggaaatgggc
gtgtcgatcaaaagcacttcaggcccggtactggagcggccgggcgacctggccgccttg
ctcaccaatctggaaccccacgatgtgctgttcatcgacgagatccatcggctctcgccc
atcgtcgaggaggtcctgtacccggcgatggaggacttccagctcgacatcatgattggc
gaggggccagcagcgcgttccatcaagctggatctgccgccgttcacattggtgggcgca
actacccgtgccgggatgctgacgaatccgctgcgcgatcgtttcggcatcgtccagcgc
ctggagttctacagcaccgcggacctggcaaccatcgtcagccgctcgggcaacatcctt
ggcctggcgatcgaggatgaaggcgccttcgagattgcccggcgcgcccgcggcacgccg
cgaatcgccaatcgcctgttgcgccgggtgcgggatttcgcccaggtgcgcggcaagggg
cacatcaccaagcccatcgccgatctggccttgaacatgctggacgtcgacgagcgtggt
ttcgaccaccaggatcgccggctgctgctgaccatgatcgagaaattcgacggcggcccg
gtgggcgtcgacagcctggctgcagcaatcagcgaggagcggcacaccatcgaggacgtt
ctggaaccctacctcatccagcagggctacatcatgcggaccccgcgcggtcgggtcgtc
acccgccacgcctacctgcatttcggcctgaacattcccaaccggctgggcgacatgccg
accggcgatgccatgcccgatgaaatcgacccatga
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