KEGG   Pseudomonas rhizosphaerae: LT40_05065
Entry
LT40_05065        CDS       T03339                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
prh  Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:prh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:prh03400]
    LT40_05065
Enzymes [BR:prh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LT40_05065
    5.6.2.6  RNA 3'-5' helicase
     LT40_05065
DNA repair and recombination proteins [BR:prh03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LT40_05065
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII Lhr_WH AAA_25 DUF5805 DprA_WH
Other DBs
NCBI-ProteinID: AIS16818
UniProt: A0A089YKC1
LinkDB
Position
complement(1105814..1110106)
AA seq 1430 aa
MNLPVPHDSPLANFHPAVSAWFRQHFAAVTPAQAQAWPLIQQGHSTLVAAPTGSGKTLTA
FLAVLDELVREGLEHQGQLPQRTTVLYVSPLKALSNDIQLNLQRPLEGIAEHLAAMDLPT
VSIVAGVRTGDTPQKERAAMRRRPPHILVTTPESLYVLLGSDSGRTMLANVRTVIVDEIH
AVAGSKRGSHLALSLERLQALCTQPLRRIGLSATQKPIDQVAQFLVGAQRTCSIVDIGHA
RQRDLAIEVPAVPLAAVMPNDVWELLYDRLAALAQAHRTTLVFVNTRRLAERVARHVSER
LGREHVAAHHGSLAKEHRLDAEQRLKRGDLQVLVATASLELGIDIGDVDLVCQIASPGSI
SAFLQRVGRSGHHVGGVPKGRLFPTSRDDLIECVALLDCVRRGELDILRIPDAPLDVLAQ
QIIAEVSCQEWPEQALLQMFRQATPYARLDDADFEGLLRMLAEGYSGRQGVRAAYLHRDA
VTRTLRGRRGSKLTAVTSGGAIADNADYSVLLEPQALNIGSVNEDFAVESLAGDIFQLGN
RSYRILRIEGGKVRVEDAHGQAPNIPFWLGEIPGRSAELSAGVARLQASIDHRLALSEGQ
PEPLLPWLQDELGLARDSAEQLLDYLARTRQALGALPSQDTLIMERFFDASGATQLVIHT
PFGSRINRAWGLALRKRFCRTFNFELQAAASEDAIVLSLSTSHSFELEEVWHYLHSHSAE
SILIQALLDAPLFGVRWRWNAATALALPRYSGGRKVAPQLQRMKGEDLIATVFPDQIACL
ENIVGEREIPDHPLVQQTLDDCLHEAMDSAGWLTLLRRIESGQITLIQRDLPSPSPLAAA
ILNARPYAFLDDAPLEERRTQAVLNRRWDEPRSADDMGELDTDAIAAVAAEAWPAPINGD
EMHEALMSLGALAEHEAQPSELALLKTLARTGRAARLTLGDGNRLWLALERMSCLQTLYP
NAELSPALQVPAHLAQTWTQESATLELIRARLSGFGPQRLGDIAAPLNLHPAVVELALLE
LESQGYVMRGQFLTHIEETQWCERHLLARIHRYTVKRLRREIEPVSLQVFMRFLLDWQCL
APGTRLQGEEALAKILEQFEGYSAPAGAWESDLLPVRLRGYDPSWLDRACRSGKTVWARL
ASSGKGTTLRGTPIVLLPRARLPLWRSLAPTVQPQELSMRAQKVEQTLAAQGAMFFDDLV
HDVRLLRTEVENALQELVAAGRVNADSFAGLRALITPAGKRQARSSRRGRGAFIGGMDDA
GRWALLQANGSAPDEAVEQIALVLLRRYGVVFWRLLQREADWLPSWRDLLRALQRLEARG
QIRGGRFIDGLSGEQFALPEAIPALREVRKRPVDGSLVSISASDPLNLAGTLLPLPGADP
QQIHKTVPALPSNRVLYRDGLPVAALIAGKPVYWSEETTELRQQLIHPPL
NT seq 4293 nt   +upstreamnt  +downstreamnt
atgaacctacccgtaccgcacgattcacccctggccaacttccatccggcggtgagcgcc
tggttccgccagcacttcgctgccgtcacgccggcccaggcccaggcatggccgttgatc
cagcaagggcactcgaccctggtcgccgcgcccaccgggtcgggcaagacgctcaccgcg
tttctggcggtactcgacgagttggtgcgagaaggtctggagcatcagggccagttgccc
cagcgcacgacggtgctgtacgtctcgcccctcaaggccctgtccaacgatatccagctg
aacctgcagcgcccgctagaaggcatcgccgagcatctggctgccatggacctgcccacg
gtgagcatcgtcgccggggtgcgcaccggagatacgccgcaaaaggagcgcgccgccatg
cgcaggcgtcctccgcacatattggtgaccacgcctgaatcactctacgtgctgctcggc
tcggattcgggccgcaccatgcttgcgaatgtacgcaccgtgatcgtcgatgagattcat
gcggtggccggcagcaagcgcggcagccatctggccttgagtcttgagcgcctgcaagcc
ctgtgcacacaacctttgcgacgcattggcctgtccgctacccagaagcctatcgatcag
gtcgcgcaatttctggtcggcgcgcagcggacctgctcgatcgtcgacatcggccacgct
cggcaacgggaccttgcgatcgaagtgcctgcggtgccacttgccgcagtcatgcccaac
gatgtctgggagctgctctacgaccgcttggcagccctcgcgcaggcccatcgaaccact
ttggtgttcgtcaacacacggcgcctggccgaacgcgtggcccggcatgtgagcgagcgc
ctggggcgcgagcacgtggcggcccaccatggcagcctggccaaggagcaccgcctggac
gcggaacagcggctcaagcgcggcgacttgcaggtattggtggctaccgcttcgctggag
ctgggtatcgatatcggtgacgtcgacctggtctgccagatcgcctcgcccggctctatc
tccgcattcctgcaaagggtcggacgttccggccaccacgtcggtggcgtacccaagggt
cgcctgtttcccacctcgcgcgatgacctgatcgagtgcgtggcgttgctggactgcgtg
cgccgcggcgaactggacatcctgcgcattcccgacgcaccgctggacgtgctggcccaa
cagatcatcgccgaggtcagctgccaggaatggccggagcaggcgctgctgcagatgttc
cgtcaggcgactccctacgctaggctcgacgacgctgatttcgaagggttgctgcgcatg
ctcgccgagggctacagcggacgtcagggtgtgcgcgcggcctatctgcatcgcgacgcc
gtgacccgtaccctgcgcggtcggcgcggcagcaagttgaccgcagtcaccagcggtggc
gcaatcgccgacaatgccgactacagcgtgctgctggagcctcaggcgttgaacatcggc
agcgtcaacgaagatttcgccgtggaaagcctcgccggcgacatcttccaactgggcaac
cgttcctaccgcatcctgcgcatcgaaggtggcaaggtcagggtcgaagacgcccatggc
caggcgccgaacattcccttctggcttggcgaaatacccggacgcagcgccgagctttct
gctggcgtggctcgcttgcaagcgtcgatcgaccaccgcctggcactcagcgaaggtcaa
cccgagccgctgctgccctggttgcaggacgaactcggcctggcccgcgacagcgccgaa
cagctgctcgactatctggcgcgcacacgccaggcattaggtgccctgccctcgcaggac
accctgatcatggagcgcttcttcgacgcctctggcgccactcagctggtcatccacacg
ccgttcggcagccgcatcaatcgtgcctggggcctggccctgcgcaagcgcttctgtcgc
acgttcaatttcgagctgcaagccgccgccagtgaagacgccatcgtgctgtcgctgtcg
accagccacagtttcgaactggaagaggtctggcattacctgcatagccacagcgccgaa
tcgatattgatccaggcgctgctcgatgcgccgctgttcggcgtgcgctggcgctggaac
gcggcgacggccctggccctgccccgctacagcggcggacgcaaggtggccccgcaactg
cagcgcatgaaaggcgaggatttgatcgccacggtatttccggaccagatcgcctgcctg
gaaaatatcgtcggcgagcgggagattcccgatcacccgctggtccagcagaccctcgac
gattgcctgcacgaggccatggacagcgcgggctggctgaccctgctgcggcgcatcgag
agcggtcagatcaccctcatccagcgcgacctgcccagcccttcgccattggcggcggct
atcctcaatgcccggccctacgcgttcctcgacgacgctccgctggaagagcgacgcacc
caggcagtcctcaaccgacgctgggacgaaccccgctcggcagacgacatgggtgaactg
gacacggatgccatcgccgccgtggccgccgaagcatggcccgcccccatcaacggcgac
gagatgcacgaagccttgatgagcctgggcgccttggccgaacacgaagcccagcccagc
gagctggcgctgttgaagacactggcgcgcaccggccgtgctgcgcgcctgacgctgggc
gatgggaatcgcctgtggctggccctggagcgcatgtcctgcctgcaaaccctttacccc
aacgccgagctatcccccgcactgcaggtgccggcgcatctggcccagacgtggacccag
gagagtgcgacgctggagctgatccgcgcccgcttgagcggattcggcccgcagcgactg
ggggacattgccgccccgctcaacctgcatcctgccgtggtggaactggcgctgctggaa
ctggaatcccagggttatgtgatgcgcggccagtttctcacccacatcgaggaaacccag
tggtgcgagcggcacctgctggcgcgtatccatcgctatacggtgaagcgcctgcggcgg
gagatcgaaccggtcagcctgcaagtgttcatgcgttttctgctcgactggcagtgcctg
gcgcccggcacccgcctgcaaggcgaggaggccctggccaaaatcctggaacagttcgaa
gggtacagcgccccggctggcgcctgggagagcgatctgctgcccgtacggctgcgtggc
tacgacccatcgtggctggaccgcgcctgccgcagcggcaagacggtctgggcgcggttg
gccagcagcggcaaaggaaccaccctgcgcggtacgcccatcgtgctgctgccccgcgcg
cgcctgcccctgtggcgcagcctggctccgacagtccagccgcaggaattgtccatgcgc
gcgcagaaggtcgaacaaaccctggccgcgcagggcgcgatgttcttcgacgatctcgta
cacgatgtgcgcctgctgcgcaccgaagtggagaacgcgctgcaggaactggtcgccgca
ggccgcgtgaacgccgacagtttcgccggattgcgcgcgctgatcacaccggccggaaaa
cgtcaggcgcgcagcagtcgccgtggtcgcggtgctttcattggcggcatggacgatgcg
gggcgctgggccttgctccaggcaaacggcagtgcccccgatgaagccgtcgaacagatc
gcgctggtgctgctgcggcgctacggcgtggtgttctggcgcctgctgcaacgcgaagcc
gactggctgcccagctggcgcgacctgctgcgggcactgcagcgactggaggcgcgcgga
cagattcgcggggggcgtttcatcgacggcttgtccggcgagcaattcgccttgccagag
gccattccagccctgcgcgaggtgcgcaaaagacctgtggatggcagcctggtgtccatt
tcggccagcgacccattgaacctggcaggtaccctgctgccattgcccggcgccgacccc
cagcagatccacaagaccgtgccagcgttgccgagcaaccgtgtgctctaccgcgacggc
ctgcccgtggcggccttgatcgccggcaagccggtgtactggagcgaagaaaccacggag
ctacgccagcagctgatccatccccccctgtag

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