Pseudomonas rhizosphaerae: LT40_05460
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Entry
LT40_05460 CDS
T03339
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh00061
Fatty acid biosynthesis
prh00071
Fatty acid degradation
prh01100
Metabolic pathways
prh01212
Fatty acid metabolism
prh02024
Quorum sensing
prh04146
Peroxisome
Module
prh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LT40_05460
00071 Fatty acid degradation
LT40_05460
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LT40_05460
09145 Cellular community - prokaryotes
02024 Quorum sensing
LT40_05460
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
prh01004
]
LT40_05460
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prh04147
]
LT40_05460
Enzymes [BR:
prh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LT40_05460
Lipid biosynthesis proteins [BR:
prh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LT40_05460
Exosome [BR:
prh04147
]
Exosomal proteins
Exosomal proteins of breast milk
LT40_05460
Exosomal proteins of breast cancer cells
LT40_05460
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AIS16882
UniProt:
A0A089YRA3
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Position
1181353..1183038
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AA seq
561 aa
AA seq
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MHPDFWNDKRPPGVPHTLPVGEFTSIVDVFDRSCSTFAQRPAFSNMGVTLSYAELDRHCA
AFACWLQQHTDLVPGDRIAVQLPNVLQYPIAVFGALRAGLVVVNTNPLYTAREMRHQFCD
SGARALVYLNLFGDKVEQVLPDTKLDYLIEARLGDLMPSAKGWLVNTLVSKVKKRVPAYR
LPLAMSFKSVLAQGAAHSPRSVALTLDDLAVLQYTGGTTGLAKGAMLTHGNLVANMQQVR
ACFRQLDEQGQPILREGFEVMIAPLPLYHVYAFTANCLCMMVTGNHNVLITNPRDIGAFI
KELKKWKFTALLGLNTLFVALMEHPTFRSLDFSHLKVTNSGGTALVKATAERWESMTGCR
IVEGYGLTETSPVACTNPYGQSARIGSVGIPVVGTALKVIDDQGAELPLGERGELCIQGP
QVMRGYWQQPEATAEALDAQGWFKTGDIAVIDPDGYVRIVDRKKDLIIVSGFNVYPNEIE
DVVMAHPQVANCAAIGIADERSGEAVKLFVVARDPQLTTAELMAYCKANFTGYKLPREIV
LRDALPMTPVGKILRRELRDG
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctgatttctggaacgacaagcgcccacccggcgtcccccatacccttcccgtt
ggtgaattcacctccatcgtcgatgtcttcgaccgctcctgtagcacttttgcccagcgt
ccggccttcagcaacatgggcgtgaccctgagctatgccgagctcgaccggcactgtgcc
gcgttcgcctgctggctgcagcagcacaccgacctggtgcccggcgaccgcatcgccgtg
cagttgcccaacgttctgcaataccccatcgcagtgttcggcgcattgcgcgcgggcctg
gtggtggtcaacaccaaccctttatataccgcacgcgagatgcgtcatcagttctgtgat
tccggtgcccgagcactggtctatttgaatctgttcggtgacaaggtcgagcaggtgctg
cccgatacgaagctcgattacctgatcgaagctcgcttgggcgatctgatgcccagcgcc
aagggctggctggtcaacacgctggtgagcaaggtcaagaagcgcgtgcccgcgtaccgt
ttacccctggcaatgtcgttcaaatcggtattggcccaaggcgcagcgcattcgccacgc
tcggtggcgctcacgctcgatgaccttgccgtgctgcaatacaccggcggcaccactggc
ctggccaagggcgccatgctcacccatggcaatctggtcgccaacatgcagcaggtacgg
gcctgttttcgacagctcgacgagcaggggcagccgatcctgcgggaaggcttcgaggtg
atgatcgcgcccctgccgctgtaccacgtgtatgcgttcaccgcgaactgcctgtgcatg
atggtcaccggcaaccataacgtgcttatcaccaacccccgcgacatcggcgccttcatc
aaggaactgaagaagtggaagttcaccgcgttgctgggtctcaacaccctgttcgtggcc
ttgatggagcaccccacgttccgttcgctggacttctcccatctgaaggtcaccaactcc
ggtggcacggcgctggtcaaggccacggccgagcgctgggaaagcatgaccggctgccgc
atcgtcgaaggctatggcctgaccgagacatcgccggtggcctgcaccaacccctacggc
cagagcgcgcgcatcggcagcgtcggcattcccgtggtcggcacggcgctgaaggtgatc
gacgaccaaggggccgagttgccgctgggcgagcgcggtgagctatgcatccagggacca
caggtaatgcgcggctactggcagcaacccgaagcgaccgccgaggcactggacgcgcaa
ggctggttcaagaccggcgacatcgccgtcatcgatcccgatggctacgtgcgtatcgtc
gaccgcaagaaagacctgatcatcgtttccggtttcaacgtctaccccaacgagatcgag
gacgtggtcatggctcatccgcaggtggccaactgcgcggccattggcatagcggacgag
cgctccggcgaggcggtcaagctgttcgtggtggcccgtgatccacagctgaccacggct
gaactcatggcctactgcaaggccaacttcaccggctacaagctgccacgggaaatcgtc
ctgcgcgatgccttgccgatgacgccggtgggcaagatcctgcggcgagaacttcgcgac
ggttga
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