Pseudomonas rhizosphaerae: LT40_05595
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Entry
LT40_05595 CDS
T03339
Name
(GenBank) DeoR faimly transcriptional regulator
KO
K02444
DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
Organism
prh
Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prh03000
]
LT40_05595
Transcription factors [BR:
prh03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
LT40_05595
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
HTH_20
HTH_Crp_2
Sigma70_r4_2
MarR
Put_DNA-bind_N
GntR
Sigma70_r4
MarR_2
HTH_Mga
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AIS16908
UniProt:
A0A089YKN1
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Position
complement(1218153..1218908)
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AA seq
251 aa
AA seq
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MNLPPRQQQILELVRERGYVSIEEMAQLFVVTPQTIRRDINQLAEVNLLRRYHGGAAYDS
SIENTAYAMRADQMRDEKQRIAEAIAAQIPDHASLFINIGTTTESIARALLNHSHLKIIT
NNLHVASILSGKDDFDVLLAGGNVRRDGGVVGQASIDFITQFKVDFALVGISGIDEDGSL
LDFDYQEVRVSQAIIANARQVILAADSSKFGRNAMVRLGPISLIDCLVTDQPPVPALLQL
LQQHKIRLEIV
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcctccccgccaacagcagatactggaactggtacgcgaacgcggctatgtc
agcatcgaggaaatggcccagctgttcgtcgtgacaccgcagaccatccgccgcgacatc
aaccagctggccgaggtcaacctgctgcgccgttaccacggtggcgccgcttacgactcg
agcatcgagaacacggcctacgccatgcgtgccgaccagatgcgtgacgaaaaacaacgc
atcgccgaagccatcgccgcccagatccccgaccacgcctcgctgttcatcaacatcggc
accactaccgaatccatcgcccgcgccctgctcaaccacagccacctgaagatcatcacc
aacaacctgcacgtggcctcgatcctcagcggcaaagacgacttcgatgtactgctggcc
ggtggcaatgtgcgtcgcgacggcggcgtggtgggtcaggcgagtatcgatttcatcacc
cagttcaaggtcgacttcgccctggtcggcatcagcggcatcgacgaagacggcagcctg
ctcgacttcgactaccaagaggttcgcgtcagccaggcgatcatcgccaacgcccggcag
gtcattctggccgccgactcgagcaaattcggccgcaatgccatggttcgtctgggcccg
atcagcctgatcgattgcctggtcaccgaccaaccgcccgtccccgccctgctgcaactg
ctgcagcaacacaagatccgcctcgaaatcgtctga
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