Pseudomonas rhizosphaerae: LT40_05695
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Entry
LT40_05695 CDS
T03339
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LT40_05695
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prh02000
]
LT40_05695
Transporters [BR:
prh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LT40_05695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AIS16928
UniProt:
A0A089YKP3
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All DBs
Position
complement(1237398..1238462)
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AA seq
354 aa
AA seq
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MKKLFLATLLGSSIALCNLASAADTDLPTLEAAAKTEGMVNSVGMPDAWANWKGTWDDLA
NKYGLKHMDTDMSSAQEVAKFAAEKDNASADIGDVGAAFGPIATKQVVTQPYKPSTWAQI
PDWAKDADGHWMLAYTGTIAFIINKQLVKAEDAPKSWADLKNGKYKVAIGDVSTAAQAAN
GVLAAAIAFKGDESNLAPGLQLFTELAQQKRLSLANPTIQTLEKGEIEVGVVWDFNGLSY
RDQIDPKRFDVLIPSDGSVISGYTTIINKYAKHPNAAKLAREYILSDAGQINLARGYARP
IRADHIKLPDDVAAKLLPAEQYRNVTPIKNPDVWEASSKALPQQWQEQVIFEMQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcttttcctggccacactgttaggttcgagcatcgcgttgtgcaacctggcc
tcggccgcggataccgatctacccaccctggaagccgcggccaagaccgaaggcatggtc
aacagcgtcggcatgcccgatgcctgggccaactggaaaggcacctgggacgacctggcc
aacaagtacggcctcaagcacatggacaccgacatgagctcggcccaggaagtggctaag
ttcgccgccgagaaagacaacgccagtgccgatatcggcgatgtcggtgcagcgttcggc
cccattgccaccaaacaggtcgtgacccagccgtacaagccttccacctgggcgcagatc
cccgactgggccaaggatgccgatggccactggatgctggcctacaccggcaccattgcc
ttcatcatcaacaagcaactggtcaaggccgaagacgcccccaaaagctgggccgacctg
aagaacggcaagtacaaggtggcgatcggcgacgtcagcacggcggcccaggccgccaac
ggcgtacttgcggcggccatcgccttcaagggcgacgagagcaacctggcccctggcctg
caactgttcaccgagctggcccagcagaaacgcttgtcgctggccaacccgaccattcag
accctggaaaaaggcgagatcgaagtgggtgtggtgtgggacttcaatggcctgagctac
cgcgaccagatcgatccgaaacgcttcgatgtactgatcccctcggacggctcggtgatc
tccggctacaccaccatcatcaacaagtacgccaagcacccgaacgcggccaagctggcg
cgtgagtacatcctcagcgatgccgggcagattaacctggcgcgcggctacgctcggccg
atccgtgccgaccacatcaagctgccggatgacgtcgcggccaagctgctgcccgccgag
cagtaccgcaacgtcaccccgatcaagaacccggatgtctgggaagccagctccaaagcc
ctgccccagcaatggcaggagcaggtgatcttcgagatgcagtga
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