Pseudomonas rhizosphaerae: LT40_06225
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Entry
LT40_06225 CDS
T03339
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LT40_06225 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
prh03011
]
LT40_06225 (rpsA)
Ribosome [BR:
prh03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LT40_06225 (rpsA)
Bacteria
LT40_06225 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
AIS17031
UniProt:
A0A089ZQ53
LinkDB
All DBs
Position
1357984..1359672
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AA seq
562 aa
AA seq
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MSESFAELFEESLKTLNLQPGAIITGIVVDIDGDWVTVHAGLKSEGVIPLEQFYNDAGEL
TIKVGDEVHVALDAVEDGFGETKLSREKAKRAECWIVLEAAFAAEEVVKGVINGKVKGGF
TVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAENSA
EREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVGDE
IDVKVLKYDRERNRVSLGLKQLGEDPWVAIKARYPESTRVMARVTNLTDYGCFAELEEGV
EGLVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFSGQ
FNKGDKISGTIKSITDFGIFIGLDGGIDGLVHLSDISWNEVGEEAVRRFKKGDELDTVIL
SVDPERERISLGIKQLEDDPFSNYVAVNDKGAIVRGIVKEVDAKGAVITLADDIEATLKA
SEISRDRVEDARNVLKEGEEVEAKIISVDRKSRVIQLSIKSKDVEDEKEAIQSLRDKPAT
SDIAAGPTTLGDLLRAQMEKQN
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagctttgcagaactctttgaagaaagcctaaaaactctcaatcttcagcca
ggcgcaatcatcaccggtatcgtcgtcgatatcgacggtgactgggttactgtccacgcc
ggtctgaagtccgagggtgtcatcccgctcgagcagttctacaacgacgctggcgaactg
accatcaaggtcggtgatgaagttcacgttgcgctggacgcggtagaagacggctttggc
gaaaccaagctgtcccgcgaaaaagccaagcgtgccgagtgctggatcgttctggaagca
gctttcgccgccgaggaagtggtcaagggcgttatcaacggtaaggttaaaggcggcttc
actgtcgacgttaacggcatccgtgcgttcctgcctggttccctggtcgatgtccgccct
gtgcgcgacactacccacctggaaggtaaagagctcgaattcaaggtcatcaagctggac
cagaagcgcaacaacgttgtcgtttcccgtcgcagtgtcctggaagccgagaactccgcc
gagcgcgaagctctgctggaatccctgcaggaaggtcagcaagtcaaaggtatcgtcaag
aacctcaccgattacggcgcattcgtcgatctgggtggcgtcgatggcctgctgcacatc
accgacatggcctggaagcgtatcaagcacccatcggaaatcgtcaacgttggcgacgag
atcgatgtcaaggttctgaagtacgatcgcgagcgtaaccgcgtatccctgggcctgaag
caactgggcgaagacccatgggttgctatcaaggcacgttacccagagagcacccgcgtc
atggcgcgcgtaaccaacctgaccgactacggctgcttcgcagagctggaagaaggcgtg
gaaggcctggtacacgtttccgaaatggactggaccaacaagaacatccacccttcgaaa
gtcgtacaagtcggcgacgaagtggaagtcatggttctggacatcgacgaagagcgtcgt
cgtatctccctgggcatcaagcagtgcaagtcgaacccgtgggaagacttctctggccag
ttcaacaagggcgataaaatctccggcaccatcaagtcgatcaccgatttcggtatcttc
attggtctggacggcggcatcgacggtctggttcacctgtccgacatctcctggaacgaa
gtgggcgaagaagccgtacgtcgtttcaagaagggcgacgagctcgacaccgtcatcctg
tcggtagatccagagcgcgagcgcatctccctgggcatcaagcagctggaagacgatccg
ttctccaactacgttgccgtcaatgacaaaggcgctatcgttcgcggtatcgtcaaggaa
gttgacgccaagggcgctgtaatcaccctggccgacgacatcgaagccactttgaaagct
tccgaaatcagccgtgaccgcgttgaagacgcgcgcaacgttctgaaggaaggcgaagaa
gtcgaagccaagatcatcagcgtcgaccgcaagtcccgcgtcatccaactgtcgatcaaa
tcgaaagacgttgaagacgagaaagaagctatccagagcctgcgcgacaagccagccact
tcggatatcgctgctggtccgaccactctgggcgacctgctgcgtgctcagatggaaaag
cagaactaa
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