Pseudomonas rhizosphaerae: LT40_07380
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Entry
LT40_07380 CDS
T03339
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh00071
Fatty acid degradation
prh00280
Valine, leucine and isoleucine degradation
prh00310
Lysine degradation
prh00362
Benzoate degradation
prh00380
Tryptophan metabolism
prh00410
beta-Alanine metabolism
prh00640
Propanoate metabolism
prh00650
Butanoate metabolism
prh00907
Pinene, camphor and geraniol degradation
prh00930
Caprolactam degradation
prh01100
Metabolic pathways
prh01110
Biosynthesis of secondary metabolites
prh01120
Microbial metabolism in diverse environments
prh01200
Carbon metabolism
prh01212
Fatty acid metabolism
Module
prh_M00087
beta-Oxidation
prh_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LT40_07380 (fadB)
00650 Butanoate metabolism
LT40_07380 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LT40_07380 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LT40_07380 (fadB)
00310 Lysine degradation
LT40_07380 (fadB)
00380 Tryptophan metabolism
LT40_07380 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LT40_07380 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LT40_07380 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LT40_07380 (fadB)
00930 Caprolactam degradation
LT40_07380 (fadB)
Enzymes [BR:
prh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LT40_07380 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LT40_07380 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LT40_07380 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LT40_07380 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AIS17233
UniProt:
A0A089YLE7
LinkDB
All DBs
Position
1611798..1613975
Genome browser
AA seq
725 aa
AA seq
DB search
MIYEGKAISVKALESGIVELRFDLKGESVNKFNRLTLEELREAIAAIKADASVQGVIVSS
GKDVFIVGADITEFVENFKLPEAELVAGNLLANRIFSDFEDLEVPTVAAINGIALGGGLE
MCLAADYRIMSSEAKVGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIASGKENGADDAL
KVGAVDAVVAPDKLEAAALDLVKRAISGEFDYKAKRQPKLAKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAASFGREKALEIEAAGFAKMAKTSAAQSLIGLFLNDQEL
KRKARGYDKVARDVSQAAVLGAGIMGGGIAYQSALKGTPILMKDINEKGIEQGLAEASKL
LGARVEKGRLTPAKMAEALNDIRPTLSYGDFGHVDIVVEAVVENPKVKQAVLAEVEAQVK
DDTILASNTSTISINLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDERRSAIDALYEANRLGQKNGKGFYAYETDKRGKP
KKVADPAALDVLKPVIYEQREVSDEDIVNWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSLGVAEFVALADRYAELGPLYQPTPKLREMARTGQTFFGQAANV
QNKGE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatctcggtgaaggctcttgaaagcggcatcgtcgaactg
cggttcgacctcaagggcgagtccgtcaacaagttcaaccgtctcacgctcgaagaactg
cgcgaagcgatcgcggcgatcaaggccgacgcatcggtccagggcgtaatcgtcagcagc
ggcaaggacgtcttcatcgtcggcgccgacatcaccgagttcgtcgagaatttcaaactg
cccgaagccgaactggtcgcgggcaatctgttggccaaccgcatcttcagcgacttcgag
gatctcgaagtgcccaccgtcgctgccatcaacggcatcgccctgggtggtggcctggag
atgtgcctggcggccgactaccggatcatgtccagcgaagcgaaggtgggcctgcctgaa
gtcaagctgggcatctacccaggctttggcggtacggtgcgcctgccgcgcatcatcggc
gccgacaatgccatcgagtggatcgcctctggcaaggaaaacggcgccgacgacgccctc
aaggtgggtgcggtcgatgcggtcgtggcgccggacaagctggaagctgctgcgttggat
ctggtcaagcgggccatcagcggcgaattcgactacaaggccaagcgccagcccaagctg
gccaagctcaagctcaatgccattgagcagatgatggccttcgaaaccgccaaggggttc
gtcgcaggccaggccgggcccaactacccggcgccggtcgaagcgatcaagaccatccag
aaagccgccagtttcggccgcgagaaagccctggagatcgaggccgccggttttgccaag
atggccaagacctcggccgcgcagagcctcatcggcctgttcctcaacgatcaggaactc
aagcgcaaggcccgtggctacgacaaggtggctcgcgatgtgagtcaggcggccgtgctg
ggcgctggcatcatgggcggcggtatcgcctaccagtcggcgctcaagggcacgccgatc
ctgatgaaggacatcaacgagaagggcatcgaacagggcctggccgaagcttccaagctg
ctgggcgcccgggtcgagaagggccgactgacgcctgcgaaaatggccgaggcgctcaac
gacattcgtccgacgctttcctatggcgatttcggccatgtcgacatcgtcgtcgaagcc
gtggtggaaaaccccaaggtcaagcaggcggtactggccgaggtcgaggcgcaggtgaag
gacgacaccatcctggcgtccaacacctcgaccatttccatcaacctgctggcccaggca
ctcaagcgcccggaaaacttcgttggcatgcacttcttcaacccggtgcacatgatgccg
ctggtcgaagtgattcgtggcgaaaaatccagtgaagtcgccgtcgcgaccaccgtggcc
tatgcccgcaagatgggcaagaacccgatcgtagtgaacgactgccccggcttcctggtg
aaccgcgtgctgtttccctacttcggtggtttcgcccgcctggtcagcgccggcgtggat
ttcgttcgcatcgacaaagtcatggaaaagttcggctggccaatgggtccggcctacctg
atggacgtggtcggcatcgacaccggccaccatggccgtgacgtgatggccgaagggttc
ccggatcgcatgaaggacgagcgtcgctcggccatcgacgcgctctacgaagccaaccgc
ctggggcagaagaacggcaagggcttctatgcctacgagaccgacaagcgtggcaagcct
aagaaagtcgccgatcctgccgctctcgatgtgctcaagccagtgatctacgagcagcgc
gaagtcagcgacgaggacatcgtcaactggatgatgatcccactgtgcctggaaaccgta
cgctgcctggaagacggcatcgtggaaaccgccgccgaggccgacatgggcctggtctac
ggtatcggtttccctcccttccgtggcggcgcgctgcgctacatcgattcgctgggcgtt
gccgagttcgtcgccctggccgaccgctacgccgagctgggtccgctgtaccagccaacg
ccgaagcttcgtgaaatggcgcgcaccgggcagaccttcttcgggcaagcggccaacgta
cagaacaagggtgaatga
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