Pseudomonas rhizosphaerae: LT40_09800
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Entry
LT40_09800 CDS
T03339
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
K02054
putative spermidine/putrescine transport system permease protein
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LT40_09800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prh02000
]
LT40_09800
Transporters [BR:
prh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LT40_09800
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GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
AIS17673
UniProt:
A0A089YMM5
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Position
complement(2162628..2164376)
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AA seq
582 aa
AA seq
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MGADPGHPPARAGCVMSWRKGLIPAIPALLFLALFFLLPVAEMLMGSFQNASGELSLGNF
ERIASTPVYARVLGITFWISALTALLSVLLAYPVAYLLTRLSPMGRERWLLWIMLPFWTS
YLVKTYAWMLLLSRKGLLTTLAADVLDNPSGLVPALSGVLIGMVHSMLPLAVITLLPIMR
SIDQRLAPAAQTLGASGSMSFFSIFLPLSAPGIAAAGLLVFITSLGFFIVPALLGSPREM
MVAQLVISSVLDLFDMNFAGALSVVLLACSLVVFVIYDRIAGLSSLGGEAPKERQSGRGL
QILIWLGHRFSGKGKAPRRSGDSALLTGYSVLLVMLLILPVLVVVPLAFTSSPFIAFPPK
LFSLKWFDEFFTSAVWQAALLRSLGVGVATALLALVLGFGATLALTRVSAGWRKGLFALF
IAPLIVPRIVIALGLLYLFSRLGLAGKDIGLVLGHTVLALPYVVVTLSAAFKQYDWRLDD
AARILGAGAFTRLRTVTLPLMSASLVSAFLLAFITSFDDLTIAIFVSGGINTTLPKQMWD
SIQLALTPTLAAVSTTLLVFIVLFAVIAQWVSRRSNSKRQGL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
ctgggagccgacccgggccaccctcctgcccgcgcaggctgcgtcatgagctggcgcaag
ggcctgattccagccataccggccctgctgtttctggcgctgttcttcctgctgccggtc
gcggaaatgctcatgggcagctttcagaacgccagtggcgaactgagcctgggcaacttc
gaacgaatcgcatcgaccccagtgtatgcacgcgttttgggtatcacgttctggatctcg
gcgctgaccgcgttactgtcggtactgctggcctacccagtggcgtacctgctgacccgc
ctctcgcccatgggccgcgagcgctggttgctgtggatcatgctgccgttctggaccagc
tacctggtcaagacctacgcgtggatgttgctgctgtcacgcaagggcctgctgacaacc
ctggccgccgatgtcctggacaatccttccgggctggtcccggcactgtcgggggtgttg
atcggcatggtccattccatgctgccgctggcggtgatcaccctgctgccgatcatgcgc
agcatcgatcaacgcctggcgcctgccgcccagaccctgggtgccagcggatcgatgagt
ttcttcagtatctttctgccgctgtcggcgcccggtatcgctgccgccggactgctggtg
ttcattaccagcctgggcttcttcatcgtgcctgcgctgctgggttcgccacgagaaatg
atggtcgcgcagctggtcatttcctcggtgctcgacctgttcgacatgaacttcgccggc
gctctgtccgtggtgctcttggcttgctcgctggtggtcttcgtgatctacgaccgtatc
gccggcctgtcgtcgctgggcggcgaggcacccaaagagcgccagtcagggcgaggtctg
cagattctgatctggctcgggcatcgattttcgggcaagggcaaagccccccggcgcagt
ggcgacagtgcgctgctgaccggctacagcgtgctgctggtcatgttgttgatcctgccg
gtgctggtggtcgtccccctggccttcaccagcagtccgttcattgcctttccacccaag
ctgttcagcctgaagtggttcgacgagttcttcacctcggcggtctggcaggcggccctg
ctgcgctccctgggcgtcggcgtggcaaccgccctgctggcgctggtgctgggcttcggc
gcaaccctagcattgacgcgggtcagtgcgggttggcgcaaggggttgttcgcgctgttc
attgccccattgatcgtgccgcgcatcgtgattgcactgggcttgctgtacctgttctca
cggctggggctggcgggcaaggacatcggcctggtgctgggccataccgtactggccctg
ccctatgtagtggtgaccctgtctgcggcattcaagcagtacgactggcgcctggacgat
gccgcgcggattctcggcgccggcgctttcacacggttgcgcacggtcaccctgccgctg
atgtcggcgagcctggtctccgcgttcctgctggccttcatcacctcgttcgacgacctg
accatcgccatcttcgtcagcggcggcatcaataccaccttgcccaagcagatgtgggac
agcatccagctggcgctgacgccgaccctggctgcggtttccaccaccttgctggtgttc
atcgtgctgtttgccgtgattgcccaatgggtgtcgcggcgttccaactccaaacgtcaa
gggctctga
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