Pseudomonas rhizosphaerae: LT40_10035
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Entry
LT40_10035 CDS
T03339
Name
(GenBank) LacI family transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
prh
Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prh03000
]
LT40_10035
Transcription factors [BR:
prh03000
]
Prokaryotic type
Helix-turn-helix
LacI family
LT40_10035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AIS17711
UniProt:
A0A089ZQI9
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All DBs
Position
2206079..2207095
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AA seq
338 aa
AA seq
DB search
MARIGSRATGLPTLAEVAKLSGVSPITASRALRGVSTVAPQLASKVLEAAQALGYVVNPA
ARALASAQSQSVVVLIPSLSNQLFIDTLEAIHGVMRPRGLEVLIGNFHYDVDEEENLIRN
YLAYKPGGILLTGMSRTERSQAMLHNSGVPCVHMMELGADGGGACVGFSQEQAGAVAARH
LLDAGRRRLGYVAAQLDPRVMQRAKGFRAALETAGVHDPQLEVLCPQPSSIGLGGELFAD
LMRRHPDVDGVFFCNDDLAQGAIYEAQRQGIAIPGRVGMVGFNDLPGSAHLVPRLTSIRT
PRAEIGRKAAQMLLDSMDGKSHCAGAIDLGFELVVRET
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaatcggctcacgcgcaaccggcctgccgaccctggccgaagttgccaaactc
tctggtgtttcccccattaccgcttcacgcgcactgcgcggggtgtccacggtcgcgcca
caactggccagcaaagtgctggaagctgcgcaggccttgggctacgtggtcaacccggca
gcccgtgccctggcttcggcgcagagccagtcggtggtggtactcattccttcgctttcc
aaccagttgttcatcgacaccctggaagccatccatggggtgatgcgtccgcgtgggctg
gaagtgctgatcggcaactttcactacgatgtcgacgaagaggaaaacctcattcgcaat
tacctggcgtacaagccgggtggcatcctgctgaccggcatgagccgtaccgaacgctcg
caggccatgctgcacaacagcggtgtgccgtgcgtgcacatgatggagctgggcgcggac
ggcgggggcgcctgtgtcggcttttcccaggagcaggccggggctgttgcggcgcggcat
ttgctagatgccggtcgccggcgcctggggtatgtggcggcgcaactcgatccgcgggtg
atgcagcgagccaaggggttcagggcggcgctcgagacggcgggggttcatgacccgcag
cttgaagtgctgtgcccgcagccttcgtcgatcggcctaggtggtgagttgttcgccgac
ttgatgcgtcggcatccggacgtggacggcgtgttcttctgcaacgacgacttggcgcaa
ggggccatctatgaggcccagcgtcagggcatcgcaattccggggcgggtggggatggtg
gggttcaacgatcttcccggctcggcgcatctggtaccccgattgacctcgattcgcacc
ccgcgtgcggagatcggccgcaaggcggcgcagatgctgctcgacagcatggacggcaaa
agccattgcgcaggggcgatcgacctgggcttcgaattggtcgtgcgcgaaacctga
DBGET
integrated database retrieval system
