Pseudomonas rhizosphaerae: LT40_11370
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Entry
LT40_11370 CDS
T03339
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
prh
Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prh03000
]
LT40_11370
Transcription factors [BR:
prh03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LT40_11370
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AIS17950
UniProt:
A0A089YW52
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Position
2513521..2514414
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AA seq
297 aa
AA seq
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MNVKQLRAFLAVAQALSFAQAGEKLHLSQPALSLTIKGLEEDLGGALLIRTTRSVSLTPE
GEALLPLARRLLADWDNTEELLRQHFTLQLGKVSIAAMPSFAGNLLPGALRIFRDRYPRV
NVAVHDVINEQVVEMVRHRRVELGIGFEPESTSSLVFTPFYTDRFVAVVPADSPLAEQAA
VTWQTLLAYDFIALQRPSAVRLLLESAVSEEHGKLAVAFESHQLSTIGRMVAHGLGVSAV
PALCIEQMHELGARCVPLESPSVERRIGLMRLPDHKLSAAAHALMEVLLEHTAHRRQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcaaacagctccgcgcctttctcgccgtggcccaggccctgagctttgcccag
gcgggcgaaaaattgcacctgtcccagcctgcgctgagcctgaccatcaagggcctggaa
gaagacctgggcggcgcgctgctgatccgtaccacgcgcagcgtcagcctcacgcccgaa
ggcgaagccctgctgccgctggcccggcgcctcctggcggattgggacaacaccgaggag
ctgctgcgccagcacttcaccctgcaattgggcaaggtgtccatcgcggccatgccgtcg
ttcgccggcaacctgttgcccggggcactgcggatctttcgcgaccgctacccacgggtc
aacgtcgccgtgcatgatgtgatcaacgagcaggtggtggagatggttcgccatcgccgg
gtcgaactgggcatcggcttcgagcctgaaagcacgtcttcgctggtgttcacgcccttc
tacaccgatcggttcgtggccgttgtgccggccgactcgcccctggctgagcaagcggcg
gtcacttggcagaccctgctggcctatgacttcattgccctgcagcgaccttcagcggtg
cgcctgctgctggaaagcgccgtcagcgaggagcacggcaagctggcggtggcgttcgaa
agtcaccagttgagcaccatcgggcgcatggtcgcccatggcctgggcgtcagcgcggta
ccggccctgtgcatcgagcagatgcacgaactgggggcgcgctgcgtgccgctggagtcg
cccagcgtcgagcgtcgaatcggcctgatgcgtctgccggaccacaagctttcggccgcc
gcacacgcgctgatggaagtgctgctggagcacacggcccaccgtcgccaatga
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