Pseudomonas rhizosphaerae: LT40_11840
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Entry
LT40_11840 CDS
T03339
Name
(GenBank) GntR family transcriptional regulator
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
prh
Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prh03000
]
LT40_11840
Transcription factors [BR:
prh03000
]
Prokaryotic type
Helix-turn-helix
GntR family
LT40_11840
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_24
MarR_2
HTH_IclR
Fe_dep_repress
TrmB
HTH_Crp_2
HTH_5
HTH_11
HTH_36
DUF6880
HTH_27
GMT-wHTH
HTH_41
HTH_CodY
MarR
HTH_28
Ribosomal_S25
HTH_29
HTH_23
EAP30
TFIIE_alpha
HTH_20
HTH_10
BLACT_WH
Motif
Other DBs
NCBI-ProteinID:
AIS18041
UniProt:
A0A089ZQQ5
LinkDB
All DBs
Position
2616154..2616906
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AA seq
250 aa
AA seq
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MKRLPLDDSFKVNRNPVTLREIVLDKLRSAIMNFQLLPGDRLVERDLCERLGVSRTSVRE
ALRHLESEGLVEFADAKGPRVAIITLEDARDIYELRCVLEGLIVQLFTLNAKAKDIRALE
KALAVNRKALEERALSDVLSSVQGFYDVLLEGSGNQVAATQLRQLQARISYLRATSVSQE
NRRGVSSDEMERMVAAIKSGDPMAAHQASVDHVRAAAKVALESLRQQRNDDHKVRDIAAP
IALKEPRIGH
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcctgcccctcgacgacagcttcaaggtcaatcgcaacccggtcaccctgcgc
gagatcgtgctcgacaagttgcgcagcgccatcatgaattttcagctcctgcccggcgac
cgcctggtggaacgcgatctgtgcgaacgtttgggcgttagccgcacctcggtgcgcgaa
gccctgcgccatctggaatccgaaggcctggtggagttcgccgacgccaagggtccgcgg
gtggcgatcattacgctggaagacgcccgcgacatctatgagctgcgctgcgtgctcgaa
ggcctgatcgtccagctgttcaccctcaatgccaaggccaaggacatccgcgccctggaa
aaggcgttggcggtcaaccgcaaggcccttgaggaacgggcgctgtcggacgtgctcagt
tccgttcaaggcttctacgacgtactgctcgaaggctcgggcaaccaggtcgccgcgacc
cagttgcgccagctgcaagcgcgtatcagctacctgcgtgccacctcggtgtcacaggaa
aaccgccgtggcgtgagcagcgacgaaatggaacgcatggttgccgcgatcaagagcggt
gacccgatggcggcgcaccaggcgtcggtcgatcatgtacgcgccgctgccaaggtggcc
ctggaatcgttgcgtcaacagcgcaacgacgaccacaaggtccgcgacatcgccgcgccc
atcgccctcaaagaaccgcgcatcggacactga
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