Pseudomonas rhizosphaerae: LT40_11860
Help
Entry
LT40_11860 CDS
T03339
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LT40_11860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prh02000
]
LT40_11860
Transporters [BR:
prh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LT40_11860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AIS18044
UniProt:
A0A089YR04
LinkDB
All DBs
Position
2619168..2620193
Genome browser
AA seq
341 aa
AA seq
DB search
MVFKKRAIAALAAATLAFTAGTAVAAEPLSFVSWGGTTQDAQKSSWADPFSKSSGTAVVM
DGPTDYGKLKAMVESGNVQWDVVDVEADFALRAASEGLLEPMDFKVIDRSKLDPRFVSDY
GVGSFYFSFVLGYNEGKVAAGKPQDWTALFDTKTYPGKRALYKWPSPGVLEIALLADGVA
ADKLYPLDLDRAFKKLDSIKKDIVWWGGGAQSQQLLASGEVAMGQFWNGRVYALQQDGAP
VGVSWKQNLAMADFLVVPKGSKNKEAAMRFVANATSAKGQADFSNLTAYAPVNTESVQRL
DSVLAPNLSTAHVDDQITLDFAYWAKNGPSIATRWNEWLVK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggtattcaaaaaacgtgcgatagcagcgttggctgcggcgaccctggcattcacggcg
ggcactgccgtggcggccgagccgttgagtttcgtcagctggggcggcactacccaggac
gcacagaagtcgtcatgggccgatccgttcagcaagagcagcggcactgcggtggtcatg
gatggcccgaccgactacggcaagctcaaagccatggtcgaaagcggcaacgtgcagtgg
gatgtggtcgacgtggaagccgacttcgccctgcgcgcggccagcgaaggcctgctcgaa
cccatggacttcaaggtcatcgaccgcagcaagctcgatcctcggttcgtttcggactac
ggcgtaggctcgttctatttctccttcgtgctgggctacaacgaaggcaaggtcgccgcc
ggcaagccgcaggactggaccgcgctgttcgacaccaagacctatcccggcaaacgcgcg
ctgtacaaatggcccagcccgggcgtgctggaaatcgccctgctggccgacggcgtcgcg
gccgacaagctctatccgctggacctggaccgcgccttcaagaagctcgactcgatcaag
aaggacatcgtctggtggggcggcggcgcgcagtcgcagcaactgctggcctccggtgaa
gtcgccatgggccagttctggaacggtcgcgtctacgccctgcaacaggacggtgcgccg
gtcggcgtgagctggaagcagaacctggcgatggccgacttcctcgtcgtgcccaagggt
tcgaagaacaaggaggctgccatgcgcttcgtggccaacgccaccagtgccaagggccag
gccgacttctccaacctgacggcctacgcgccggtcaacaccgaaagcgtacagcgcctg
gactcggtcctggcgcccaacctgtcgaccgcgcacgtcgacgaccagatcactctggac
ttcgcctactgggccaagaacggcccctctatcgcgacacggtggaacgaatggctggtc
aagtga
DBGET
integrated database retrieval system
