Pseudomonas rhizosphaerae: LT40_12050
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Entry
LT40_12050 CDS
T03339
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LT40_12050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prh02000
]
LT40_12050
Transporters [BR:
prh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LT40_12050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
nSTAND3
AAA_16
AAA_29
nSTAND1
Sigma54_activat
ATP-synt_ab
NACHT
RsgA_GTPase
AAA_24
AAA_19
NB-ARC
GvpD_P-loop
FtsK_SpoIIIE
AAA_23
MobB
Motif
Other DBs
NCBI-ProteinID:
AIS18078
UniProt:
A0A089YNQ9
LinkDB
All DBs
Position
complement(2661184..2662896)
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AA seq
570 aa
AA seq
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MSHKTLIVEGLSVEFAGQRVVRNLSFTLEPGKTLALVGESGSGKSVTARSLIGLAGEGAQ
VRARRLQYGDLDLLALSDRQWRRVRGKDIGFVLQDALVSLDPLRPVGKEILEVLRTHGWG
DRASRAARVLQLLERVGVPEPALRARQRSGELSGGLRQRALIASALALDPGLVIADEPTT
ALDATVQAQILGVLQEIKAQGSSLLIISHDLAVVAQLADEVLVLQHGEVVEQGSMHQVLT
APRHPYTRSLLDAVPAEHERGTRLSPGQRTATLARAPRLDQPVLLHARGLGKRYVGPDQQ
VRQVVDGVDFELRAGQTLGIVGESGSGKTTVARMALGLLETDDGQVCFLDQPWNGSANTR
VAESQRRALRRDISVIYQDPLSSFDPRWSVGQILADALDVAGIAPPEQAPRIRSLLQQVR
LPAELAARRPLQLSGGQRQRVAIARAIASNPKVIVCDEPVSALDVSVQAQVLDLLADLQA
ELGLAYLFISHDLGVIRHVSDEVLVMRHGQVVERAPVEQLFESPQHPYTQRLLGAVPRLP
SAGVPLQVPPLEPENAVLLFDESRLWKIAI
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagccacaagacgctgatcgtcgaaggcctgagcgtggagttcgccgggcaacgcgtg
gtgcgcaacctgtcgttcaccttggagccgggcaagaccctggccttggtcggcgagtcc
ggctcgggcaagagcgtcactgcgcgcagcctgatcggcctggccggagagggtgcacaa
gtgcgtgcacggcgcctgcaatacggtgatctcgacctgctcgccttgagcgaccgccag
tggcgtcgagtgcgcggcaaggacatcggtttcgtgctgcaggacgccctggtttcgctc
gacccgctgcggccggtcggcaaggaaatcctcgaagtgctgcggacccatggttggggc
gaccgtgcttcccgtgccgcgcgcgtgctgcaattgctggaacgggtcggggtgccggaa
ccggccctgcgcgcccggcagcgctcgggcgaattgtccggcggattgcgtcagcgtgcg
ttgatcgccagcgcgctggccctggatccgggcctggtgatcgccgacgagccgaccacc
gcactggacgccaccgtgcaggcgcagattctcggcgtattgcaggaaatcaaagcccag
ggcagttcgttgttgatcatcagtcacgatctggcggtggtcgcgcaactggccgacgag
gtgctggtgttgcagcacggtgaagtggtggagcagggcagcatgcaccaggtgctgacc
gcgccgcgccatccctacacccgcagcctgctcgatgcggttccggccgagcatgaacgt
ggtacccggctcagcccaggtcaacgcaccgccacgctcgcccgcgcaccacggctcgat
cagcccgtgctgttgcacgcccgtggcctgggcaagcgctatgtcgggcctgatcagcag
gtgcgccaggtggtcgacggtgtcgatttcgaactgcgcgccggccagaccctgggcatc
gtcggtgaatccggttcgggcaagaccactgtggcgcgtatggccctgggactgctcgag
acggacgacgggcaagtgtgctttctcgatcaaccctggaacggcagcgccaatacacgg
gtcgccgaaagccagcgtcgggcgttgcggcgcgacatcagcgtgatctatcaggacccg
ctcagttcgttcgacccgcgctggagcgtcgggcagattctagccgatgcgctggacgtg
gccggcattgcgccgcccgaacaggcgccacgcattcgcagtttgctgcagcaggtgcgt
ttgcctgccgagttggcggcgcggcggcccctgcaactctccggtggccagcgccagcgg
gtggcgattgcccgggccattgccagcaaccctaaggtcatcgtctgcgacgagccggta
tcggcactggatgtctcggtccaggcccaggtgctggacttgctcgccgacctgcaagcc
gaactgggcctggcttacctgttcatttcccacgacctgggcgtcatccgtcatgtcagc
gacgaggtgctggtgatgcgccatggtcaggtggtcgagcgcgcgccggtcgagcagttg
ttcgagtcgccgcagcacccgtacacccaacgcctgctcggtgccgtgccacgcctgccc
agcgctggcgtgccgttgcaggtaccgcccctggagccggaaaacgccgtgctgctgttc
gacgaatcccgcttgtggaagatcgccatttga
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