Pseudomonas rhizosphaerae: LT40_12830
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Entry
LT40_12830 CDS
T03339
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh00020
Citrate cycle (TCA cycle)
prh00190
Oxidative phosphorylation
prh00650
Butanoate metabolism
prh00720
Other carbon fixation pathways
prh01100
Metabolic pathways
prh01110
Biosynthesis of secondary metabolites
prh01120
Microbial metabolism in diverse environments
prh01200
Carbon metabolism
Module
prh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
prh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
prh_M00149
Succinate dehydrogenase, prokaryotes
prh_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LT40_12830 (sdhB)
00650 Butanoate metabolism
LT40_12830 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
LT40_12830 (sdhB)
00720 Other carbon fixation pathways
LT40_12830 (sdhB)
Enzymes [BR:
prh01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LT40_12830 (sdhB)
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Motif
Pfam:
Fer2_3
Fer4_8
Fer4_17
Fer4_10
Fer4_7
Fer4_9
Fer4_18
Fer4_2
Fer4
Motif
Other DBs
NCBI-ProteinID:
AIS18220
UniProt:
A0A089YWT6
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All DBs
Position
complement(2834330..2835034)
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AA seq
234 aa
AA seq
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MLQVSVYRYNPDQDAAPSMQEFQVDTGGKDVMVLDVLALIKEQDEGFSYRRSCREGVCGS
DGMNINGKNGLACITPLSAVVKGNKLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFLQN
DTPAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRFLAD
SRDTRTSERLASMDDPFSVFRCRGIMNCVSVCPKGLNPTKAIGHVRNMLLSNGV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaagtcagtgtttatcgctataacccggaccaggacgctgcgccgtccatgcag
gaattccaggtcgacaccggtggcaaggatgtgatggtgctggacgtgctggccctgatc
aaggaacaggacgaagggttctcctatcgccgctcctgccgcgaaggcgtgtgtggttcc
gatggcatgaacatcaacggcaagaacggcctggcgtgcatcacgccgctgtccgctgtc
gtaaaaggtaacaagttgatcgtccgtccgctgccagggttgccggttatccgtgacctg
gtcgtggatatgagcatcttctacaagcagtacgagaaggttaagccgttcttgcagaac
gatacgccggctccggccatcgagcgcctgcaaacaccggaagagcgtgaaaagctggac
ggtctgtacgagtgcattctgtgtgcttgctgctcgacttcctgcccgtcgttctggtgg
aacccggacaagttcctgggcccggcagcattgctgcaggcataccgtttcctggccgac
agccgtgatacccggaccagcgagcgtctggcgtccatggatgatccgttcagcgtattc
cgctgccgcggcatcatgaattgcgtcagcgtctgcccgaaaggcttgaaccccaccaag
gccatcggccacgtgcggaacatgctgttgtccaacggcgtctga
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