Pseudomonas rhizosphaerae: LT40_13015
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Entry
LT40_13015 CDS
T03339
Name
(GenBank) penicillin-binding protein
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh00550
Peptidoglycan biosynthesis
prh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LT40_13015
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
prh01003
]
LT40_13015
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prh01011
]
LT40_13015
Enzymes [BR:
prh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LT40_13015
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LT40_13015
Glycosyltransferases [BR:
prh01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LT40_13015
Peptidoglycan biosynthesis and degradation proteins [BR:
prh01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LT40_13015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
PBP_1A_C
Motif
Other DBs
NCBI-ProteinID:
AIS18252
UniProt:
A0A089YV18
LinkDB
All DBs
Position
complement(2869418..2871742)
Genome browser
AA seq
774 aa
AA seq
DB search
MTRTRSSRTPKKSPSGGLRTWLGWGLKLGLVGLVILAGFAVYLDAVVQEKFSGKRWTIPA
KVYARPLELFVGQKLAKNDFLTELDALGYRRQTSVDGPGTDSVNGNTVDLNTRGFQFYEG
LEQPQAVRVKFSGDYVSELSGSGGKKVAVVRLEPLLIGGLYPKNLEDRILIKLDQVPPYL
LDTLVTVEDRDFYHHFGVSPKSIARAVWVNTSSGAMRQGGSTLTQQLVKNFYLTNERSLT
RKLTEAMMAVLLELHYDKGEILEAYLNEVFVGQDGQRAVHGFGLASQFFFSQPLSELKLH
QVALLVGMVKGPSSYNPRRNPERAMERRNLVLDLLAQQGVATQEAVDAAKKMPLGVTKRG
SLADSSFPGFLDLVKRQLRDDYRDEDLTEEGLRIFTSFDPILQMKAESSVTDTFKRLAGR
KGSDEVEAAMVVTNPESGEVQALVGSRVPGFAGFNRALDAVRPIGSLIKPAVYLTALEQP
SKYTLTSWVQDVPFSVKGADGQIWKPQNYERNSNGTVFLYQGLAHSYNLSTARLGLDLGV
PNVLKTLGKLGVQVDWPAYPSMLLGAGGLAPMQVATMYQTLANGGFNTPMRGIRSVLTAE
GEPLKRYPFQIQQRFDPASIYLIQNAMQRVMREGTGRSVYSVLPSNLNLAGKTGTSNDSR
DSWFAGFSQDVLAVVWLGRDDNGKTPFTGATGALQVWTSFMKKADPLPLDTPVPENIVQA
WVDAKTGQGSDASCPNAVQMPYIRGSEPTPGTACGGANPATDDSVMDWVKGWLN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaacccgatcttcccgtacccccaaaaaatcgccttcaggcggcctgcgcacc
tggcttggctggggcctcaagctgggcttggtaggcctggtgatcctggccggctttgcc
gtctacctggacgccgtggtccaggagaaattctccggcaagcgctggaccattcccgcc
aaggtgtacgcccgcccgctcgagctgttcgtcggccagaaactggccaagaatgatttc
ctgaccgaactcgacgcgcttggctaccgtcggcaaaccagtgtcgatggtccgggcacc
gactcggtcaacggcaatacggtcgacctcaatacccgcggcttccagttctacgagggc
cttgaacaaccccaggccgtgcgcgtgaagttttccggcgactatgtctcggaactcagc
ggcagtggtggcaagaaggttgccgtggtgcgtctcgagccgctgctgatcggcggtctt
tatccgaaaaacctcgaggaccgcatcctgatcaagctcgaccaggtgccgccgtacctg
ctcgacaccctggtgaccgtcgaggaccgcgacttctaccaccacttcggcgtctcgccc
aagtccatcgcccgcgccgtctgggtcaatacctcgtccggggccatgcgccagggtggc
agcaccttgacccagcagttggtcaagaacttctacctgaccaacgagcgcagcctgact
cgcaagttgactgaagcgatgatggcggtgctgctggaactgcactacgacaaaggtgaa
atcctcgaggcctacctcaacgaggtcttcgtcggccaggacggccagcgcgccgtgcac
ggcttcggtctggccagccagttcttcttcagccagccgctgtccgagctcaagctgcac
caggttgcgttgttggtgggcatggtgaaggggccgtcttcctataacccgcgccgcaat
ccggagcgggcgatggaacgccgcaacctcgttctcgacctgctggcccagcagggtgtg
gcaacccaggaggcggttgacgcggccaagaagatgccgctgggcgtgaccaagcggggc
agcctggcagacagctcgttccccggcttccttgatctggtcaagcgccagctgcgcgac
gactatcgcgatgaagacttgaccgaagaaggcctgcgcatcttcaccagcttcgaccct
atcctgcagatgaaagccgagtcgtcggttaccgacaccttcaagcgcctggccggacgc
aagggctcggacgaggtcgaggcggccatggtcgtcaccaaccccgaaagcggtgaagtg
caggccttggtcggcagtcgtgtaccgggcttcgccggtttcaaccgagcactcgatgcg
gtgcgcccgatcggctcgctgatcaagccagcggtgtacctgaccgcgctggagcaaccg
agcaaatacaccctgaccagttgggtgcaggacgtgccgttctcggtcaagggcgcagac
ggccagatctggaagccgcagaactacgaacgcaactccaacggcacggtgttcctctac
cagggccttgcccattcctacaacctgtcgacggcccgtttgggcctggacctgggcgtg
cccaacgtgctgaagaccctcggcaagctgggtgtacaggtcgattggccggcttaccca
tcgatgttgctgggggcgggcggcctggcacccatgcaggtggcaaccatgtatcagacc
ctggccaatggcggtttcaacacgccgatgcggggtatccgcagtgtgctgacagccgaa
ggtgaaccgctcaagcgctacccgttccagatccagcagcgcttcgatccggcctccatc
tacctgatccagaacgccatgcagcgggtgatgcgcgaaggtaccgggcgttcggtctac
agcgtgctgccgagcaacctgaacctggccggcaagaccggtaccagtaacgactcgcgc
gacagctggtttgccggcttcagtcaggacgtgctggccgtggtctggctgggccgtgac
gacaacggcaagacaccgttcaccggcgccaccggtgcgttgcaggtctggaccagcttc
atgaagaaagccgatccgctgccgttggatacaccggtgccggaaaacatcgtgcaagcc
tgggtcgacgccaagaccggacagggctctgacgcaagctgccccaacgccgtgcagatg
ccgtatattcgcggcagcgaaccgactccaggcaccgcatgcggcggcgccaatccggcc
accgacgattcggtgatggactgggtcaaaggctggttgaactaa
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