Pseudomonas rhizosphaerae: LT40_14320
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Entry
LT40_14320 CDS
T03339
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
prh
Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prh02000
]
LT40_14320
Transporters [BR:
prh02000
]
Other transporters
Pores ion channels [TC:
1
]
LT40_14320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AIS18494
UniProt:
A0A089YSA7
LinkDB
All DBs
Position
3172982..3175156
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AA seq
724 aa
AA seq
DB search
MSQAVAAAIALGATPAFAAQGDEESVSLQAVTVTATRRAESLQKVPVAVSVVDGEQLERD
NRNGVASIVQQVPSLNFRTGASNKDTSLFIRGVGTISTSPGVEPTVATVIDGVVYGRPGQ
ATLDLLDLERIEVLRGPQGTLFGKNASAGVLNIVTKAPTEEPHGYIDQSYYSGNESRTRF
GIGGSLIPDTLKGSLTTLFGSYDGNVDNRANGHEVNGYNRKGVRGKLEFTPSDDLTLTLA
ADYMQSHDDAPNGVVSKALTPAFAGALAPVSASGHSRDIASDYRSHVEDINKGLSAQLDW
NLGDYTLTSITAWRGWNNTQWQDGDRLATITSAFPGTEDKGDLSYDQYSQEVRLASPKGE
FVEYVGGLFYMHGKDDETYRRTLVTPTGSQRGVADYTTTSDSYSAFGETTLNFTSRLRGI
AGLRWTHDDLEYDHRRVSTSATTVSGIQPGTRSSGSVDEDGWSGRLGVQYDLSDDVMAYV
TYSRGYKGPAYNVFFNMQPRDTDALKPETSNTWEAGIKASAWDNRLTTNLAVFHSEYDNY
QANFFDTVANQVVTRLINAGSVSTEGVELDYALQATQNLKLSGALAYTRARIDQFSCPAG
AAASCNVDGKTLPYSPDWKSYVRADYSIPLANGLDVELGTDYSWQSEVQYDISQNPDTTQ
GAYGIWNASIALADYTNGWRVALLGKNLADKSYSPMLASGSGYIYRAVPRDDERYFGVQL
RKDF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
ttgtcccaggccgtcgctgcggccatcgccttgggcgcgacgcccgcctttgccgcccaa
ggcgatgaagagtcggtcagcctgcaggccgtcacggtcacggccacgcggcgcgccgag
tcgctgcagaaagtgcccgtggcggtgtcggtggtcgacggcgaacaactggaacgggac
aaccgcaacggcgttgcgagcatcgtgcaacaggtgcccagcctgaatttccgcaccggc
gcctcgaacaaggacacctcgctgttcatccgtggggtgggtaccatttccacctccccc
ggcgtggagcccaccgtggccacggtcatcgatggcgtggtgtacgggcgccctggccag
gccaccctggacctgttggatctggaacgcatcgaagtgctgcgcggcccccaaggcacg
ctgttcggcaagaacgcctcggccggcgtgctgaacatcgtgaccaaggcgcccaccgaa
gagccccacggttacatcgaccagtcgtactacagcggcaacgaaagccgcacccgcttc
ggcatcggtggcagcctgatccccgacaccctcaagggctcgctgaccacgctgttcggc
agctacgacggcaacgtcgacaaccgcgccaatggccacgaagtcaacggctacaaccgc
aagggcgtacgtgggaagctcgagttcacccccagtgacgacctgaccctgaccttggcc
gctgactacatgcagagccacgacgacgcgcccaatggcgtcgtcagcaaggcactgact
cccgcgttcgcgggcgccctggcgccagtctcggccagcggccacagccgtgatatcgcc
agcgactaccgcagccatgtcgaggacatcaacaagggtctgtcggcccagttggactgg
aacctgggcgactacaccctgacctcgatcaccgcctggcgcggctggaacaacacccaa
tggcaggacggcgaccgcctggcgaccatcactagcgccttccccggcacggaagacaaa
ggcgacctgagctacgaccagtactcccaggaagtgcgcctggcctcgcccaagggagag
ttcgtggagtacgtcggcgggctgttctacatgcacggcaaggacgacgaaacctaccgc
cgcaccttggtgacaccgaccggcagccagcgcggcgtggccgactacaccaccaccagc
gacagctactcggcgttcggtgagaccaccctcaacttcacttcacggctgcgcggcatc
gctggcctgcgctggacccacgacgacctggaatacgatcaccgtcgcgtgtcgacctcg
gccaccaccgtcagcggcatccagccgggcacccgcagctcaggctcggtggatgaggat
ggctggtccggacgactgggtgtgcagtacgacctcagtgacgacgtcatggcttatgtc
acctattcacgcgggtacaaaggccccgcctacaacgtgttcttcaacatgcagccgcgc
gacaccgacgcgctcaaaccggaaacctccaacacctgggaagcggggatcaaggccagt
gcctgggacaatcgcctgaccaccaacctggcggtctttcacagcgagtacgacaactac
caggcgaacttcttcgacaccgtggccaaccaggtggtgacccgtctgatcaacgccggc
agcgtcagcaccgaaggcgtcgagctggactacgccctgcaggccacgcagaacctcaag
ctgtccggcgcactggcctacacccgtgcgcgcatcgatcagttcagttgcccggccggc
gcggcggcttcctgcaacgtcgacggcaagaccctgccctacagccccgactggaagagc
tacgtgcgcgccgactacagcattccattggccaatggcctggatgtggagctggggacc
gattacagctggcagagcgaggtgcagtacgacatcagccagaacccggacaccacgcaa
ggtgcctatggcatctggaatgccagcatcgccttggccgactacaccaatggctggcgt
gtcgcgctgctgggcaagaacctggccgacaagtcctactcgccgatgctggccagtggc
agcggctatatctaccgcgccgtgcctcgtgatgacgagcgctacttcggcgtgcaactg
cgcaaggatttctga
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