KEGG   Pseudomonas rhizosphaerae: LT40_14375
Entry
LT40_14375        CDS       T03339                                 
Name
(GenBank) hypothetical protein
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
prh  Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:prh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:prh03016]
    LT40_14375
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:prh02048]
    LT40_14375
Transfer RNA biogenesis [BR:prh03016]
 Prokaryotic type
  tRNA degradation factors
   LT40_14375
Prokaryotic defense system [BR:prh02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    LT40_14375
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: AIS18505
UniProt: A0A089YYE4
LinkDB
Position
complement(3188069..3188473)
AA seq 134 aa
MKQLMLDTNTVSHLLKGHPGVIKNLSAVPMTSVCISSITEAELLYGLAKRPSAQRLAGIV
TAFLKTIDILPWGSQAAQAYGSSRATGESRGHCLGALDGLIAAHSLSLGMTLVTSDKAFR
LVEGLEIQDWCEVA
NT seq 405 nt   +upstreamnt  +downstreamnt
atgaagcaattgatgctggacaccaataccgtgagccacctgctcaaggggcatccgggt
gtcatcaagaacctaagcgctgtgccgatgacatcggtgtgcatctcctccatcaccgag
gcagaattgctttatggcttggccaagcggccatctgcgcagcggttggcagggattgtc
accgcgttcctgaaaaccatcgatattcttccttggggcagccaggcggcccaggcctat
ggttcgagccgggccacgggcgagagtcgtgggcactgtctgggcgcgttggacggcctt
atcgccgcccatagcctttccctcgggatgacgctggtcaccagcgacaaggcgtttcgc
ttggtcgaggggcttgaaatacaggactggtgcgaggtcgcgtga

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