Pseudomonas rhizosphaerae: LT40_14430
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Entry
LT40_14430 CDS
T03339
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh00260
Glycine, serine and threonine metabolism
prh00460
Cyanoamino acid metabolism
prh00630
Glyoxylate and dicarboxylate metabolism
prh00670
One carbon pool by folate
prh00680
Methane metabolism
prh01100
Metabolic pathways
prh01110
Biosynthesis of secondary metabolites
prh01120
Microbial metabolism in diverse environments
prh01200
Carbon metabolism
prh01230
Biosynthesis of amino acids
prh01240
Biosynthesis of cofactors
prh04981
Folate transport and metabolism
Module
prh_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LT40_14430 (glyA)
09102 Energy metabolism
00680 Methane metabolism
LT40_14430 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LT40_14430 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LT40_14430 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LT40_14430 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LT40_14430 (glyA)
Enzymes [BR:
prh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LT40_14430 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
OKR_DC_1
Phage_capsid
Motif
Other DBs
NCBI-ProteinID:
AIS18516
UniProt:
A0A089ZR00
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All DBs
Position
complement(3198920..3200173)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDVLLAAMNAEDQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEQLAIDRAKQLFGADYANVQPHSGSQANAAVYLALLQAGDTVLGMS
LAHGGHLTHGAKVSFSGKLYNAVQYGIDTDTGLIDYDEVERMAVEHQPKMIIAGFSAYSK
TLNFARFREIADKVGAYLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LARANEALEKKFNAAVFPGGQGGPLMHVIAAKAVCFKEALEPEFKTYQQQVIDNAQAMAG
VFVERGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTSRGFKVAQCTELAGWICDILDNLGDADVEANVARHVTALCSDFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaaacaagatcagatccaaggttatgacgatgtcctgctggcagccatgaac
gccgaggaccagcgtcaggaagaccacatcgaactgatcgcctcggaaaactacaccagc
aagcgcgtgatggaagcccagggcagcggcctcaccaacaagtacgccgaaggctatccg
ggcaagcgctactacggcggttgcgagcacgtggacaaggtcgagcaactggccatcgac
cgcgccaagcagctgttcggcgccgactatgccaacgttcagcctcactccggttcccag
gccaacgccgccgtctacctggcgctgctgcaggccggcgacaccgtgctgggcatgagc
ctggcccacggcggccacctgacccacggcgccaaggtcagcttttccggcaaactctac
aacgccgtgcagtacggcatcgacaccgacaccggcctgatcgactacgacgaggtcgag
cgcatggcggtcgagcatcagccgaagatgatcatcgccggcttctcggcctactccaag
accttgaatttcgcccggttccgcgagatcgccgacaaggtcggcgcctacctgttcgtc
gacatggcccacgtggccgggttggttgccgccggcctgtaccccaacccgattccgttc
gccgacgtggtcaccaccaccacccacaagaccctgcgtggcccacgtggcggcctgatc
ctggcccgtgccaacgaagccctggaaaagaaattcaacgccgccgtgttccccggcggt
cagggtggcccgctgatgcacgtgatcgccgccaaggcggtgtgcttcaaggaagcgctg
gagcctgaattcaagacctaccagcagcaggtcatcgacaacgcccaggccatggcaggg
gtgttcgtcgagcgcggctacgacgtggtctccggcggtaccgacaaccacctgttcctg
gtcagcctgatccgccagggcctgaccggcaaggatgccgacgccgccctgggtcgtgcg
cacatcaccgtgaacaagaacgcggtgcccaacgatccgcaatcgccgttcgtgacctcg
ggcctgcgcatcggcaccccggcggtcaccagccgtggtttcaaggtggcccaatgcacg
gagctggccggctggatctgcgacatcctcgacaacctgggcgatgccgacgtcgaggcc
aacgtggcccgccacgtgacggccctgtgcagcgacttcccggtctaccgctga
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