Pseudomonas rhizosphaerae: LT40_15440
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Entry
LT40_15440 CDS
T03339
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh00250
Alanine, aspartate and glutamate metabolism
prh00310
Lysine degradation
prh00350
Tyrosine metabolism
prh00650
Butanoate metabolism
prh00760
Nicotinate and nicotinamide metabolism
prh01100
Metabolic pathways
prh01120
Microbial metabolism in diverse environments
Module
prh_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LT40_15440 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LT40_15440 (gabD)
00310 Lysine degradation
LT40_15440 (gabD)
00350 Tyrosine metabolism
LT40_15440 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
LT40_15440 (gabD)
Enzymes [BR:
prh01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
LT40_15440 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
LT40_15440 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
LT40_15440 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AIS18702
UniProt:
A0A089YWA9
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Position
3413228..3414688
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AA seq
486 aa
AA seq
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MLKHSLRDPSLLVEQAYANGQWIDADDGATLAVTNPADGSTIAHVPALQGAETQRAIAAA
EACFTTWRQVPAAERAKLLEKWYQLIMDNQEDLALIMTAEQGKPLTESRGEIAYGASFVK
WFAEEARRIYGDTIPSPAADRRILVLKQPIGVVAAITPWNFPNAMITRKCAPALAAGCPV
LVKPSEMTPLSALALAVLAERAGIPAGVFNVLTGMPAGVGGEMTSNPAVRKLSFTGSTRV
GQLLMSQCASTIKRLSLELGGNAPFIVFDDADLDLAIAGVMQSKFRNAGQTCVCANRILV
QDGIYARFAERLKAAVAELKVGDGLAEGVTIGPLINAAAVDKVARHISDAVEKGASVAIG
GLPQNDGLYVQPTVLLDANADMLLAGEETFGPVAPLFRFHTEEEALALANATPYGLGAYY
FTQDMRRAWRVGERLEFGMVGLNTGIISMEVAPFGGMKQSGTGREGSKYGLDEFLEVKAW
HIGGLG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcattcactgcgtgacccttccctgctcgtcgagcaggcctacgccaacggc
cagtggatcgatgccgatgacggcgccaccctagcggtgaccaaccccgccgatggcagc
accatcgcccacgtcccggccctgcagggcgccgaaacccaacgcgcgatcgcggcggcc
gaagcctgtttcaccacttggcgccaagtcccggcggccgagcgcgccaagctcctggaa
aagtggtaccaactgatcatggacaaccaggaagacctggccctgatcatgaccgccgaa
caaggcaagcccttgaccgagtcgcgcggcgaaatcgcctacggcgccagcttcgtcaaa
tggttcgccgaggaagcccggcgcatctacggcgacaccattccgtcgcccgctgccgac
cgacgcatcctggtgctcaagcaaccgatcggcgtggtcgcggcgatcaccccgtggaat
ttccccaatgccatgatcacccgcaagtgcgcgccggcattagccgccggctgcccggtg
ctggtcaagccctcggagatgaccccgctgtcggccctggccttggctgtgctagccgag
cgcgcgggcattccggccggggtgttcaacgtgctcaccggcatgccggcgggcgtgggt
ggcgagatgaccagcaacccggcggtgcgcaaattgtcgttcaccggttccacccgcgtg
ggccaactgttgatgagccagtgcgcctcgaccatcaagcgcctgagcctggaactgggc
ggcaacgcgccgttcatcgtgttcgacgacgccgacctggacctggccatcgccggggtc
atgcagagcaaattccgcaacgccgggcagacctgcgtgtgcgccaaccgcatcctggtg
caggacggcatctatgcccgttttgccgagcgcctgaaggcggccgtggccgagctgaaa
gtcggcgatggtctggccgagggcgtgaccatcggcccattgatcaatgcggcagcggtg
gacaaggtggcccgccacatcagcgacgcggtggagaaaggcgcgagcgtggccatcggc
ggattgccgcaaaacgacggcctgtacgtgcagcccacggtgttgctggacgccaacgcc
gacatgctgctggccggtgaggaaaccttcggcccggtggcgccgctgttccgctttcat
accgaagaagaagccctggctctggccaacgccacgccctatggcctgggcgcctactac
ttcacccaggacatgcgccgcgcctggcgcgtgggcgagcgcctggagttcggcatggtg
ggcttgaacaccgggatcatttccatggaggtggcgccgttcggcggcatgaagcaatcg
ggcaccggccgcgagggttccaagtatggcctggatgaattccttgaagtgaaggcctgg
catatcggtgggttgggttga
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