Pseudomonas rhizosphaerae: LT40_16540
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Entry
LT40_16540 CDS
T03339
Name
(GenBank) LysR family transcriptional regulator
KO
K21711
LysR family transcriptional regulator, putative pyruvate carboxylase regulator
Organism
prh
Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prh03000
]
LT40_16540
Transcription factors [BR:
prh03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LT40_16540
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
AIS18906
UniProt:
A0A089ZR78
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All DBs
Position
complement(3678035..3678997)
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AA seq
320 aa
AA seq
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MRKSLMRLTLRQLQVFNEVCDLRSYSRAAEEMSLTQPAVSLQIRQLEELVGQPLFDYVGK
KLYLTEAAEALQAASRDIFGRLENLDMQLSDMQGSLQGQLKLAVESSAKYFTPHLFAAFR
TLHPEVNLQLTVVNRAQVVRRLSDNRDDVTIMSMVPQDMGLDFMPFLNNPIVAVAPPEHP
LCQLDRVNLQDLQAYPLLVREQGSGTRRACEEYFKEKRVHFTQTLEVASAEAQRECVIAG
LGLALLTRHAVARELSAGTLRELRVEELPLQRSWCVVQAKARRQSPVALAFAAFIRTERA
QITALVERFAGHPPVRPASS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagtcactgatgcgcctgacattgcgccaattgcaggtgttcaacgaggtgtgc
gatctgcgctcctacagccgtgcagccgaagaaatgtcgctgacccaaccggcggtcagc
ttgcagattcgccagctggaagagctggtcggccagccgttgttcgactatgtgggcaag
aagctctacttgaccgaggccgccgaagcattgcaggctgccagtcgcgacattttcggc
cgcctggaaaacctcgacatgcagctctccgacatgcagggctcgttgcagggtcagctc
aagctggcggtcgagtccagtgccaagtacttcacgccacacctgttcgccgcattccgc
accctgcatccagaggtcaatctgcagctcacggtggtcaaccgcgcccaggtggttcgc
cgcttgagtgacaaccgcgacgacgtgaccatcatgtcgatggtgccgcaggacatgggg
ctggacttcatgcccttcctcaacaatccgatcgtggcggtggcgccgcccgagcacccg
ctgtgccagctcgaccgggtcaacctgcaggacctgcaagcctatccgttgctggtgcgc
gagcaaggctcgggcacacgacgggcctgcgaggaatacttcaaggagaaacgcgtgcac
ttcacgcagacactcgaagtggcgtctgccgaagcccagcgtgagtgcgtgatcgccggg
ctgggcctagcgctgctgacacgccatgcggtggcccgagagctatctgcaggcacgctg
cgcgagttgcgcgtggaagagctgccgctgcaacgcagctggtgcgtggtacaggccaag
gcccggcgtcagtcgccggtggcgttggcctttgctgcgttcattcgtaccgagcgggcg
cagatcacggcgctggtcgagcgctttgccgggcacccgccggtgcggcctgccagtagt
tga
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