Pseudomonas rhizosphaerae: LT40_16550
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Entry
LT40_16550 CDS
T03339
Name
(GenBank) pyruvate carboxylase subunit B
KO
K01960
pyruvate carboxylase subunit B [EC:
6.4.1.1
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh00020
Citrate cycle (TCA cycle)
prh00620
Pyruvate metabolism
prh00720
Other carbon fixation pathways
prh01100
Metabolic pathways
prh01120
Microbial metabolism in diverse environments
prh01200
Carbon metabolism
prh01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LT40_16550
00620 Pyruvate metabolism
LT40_16550
09102 Energy metabolism
00720 Other carbon fixation pathways
LT40_16550
Enzymes [BR:
prh01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
LT40_16550
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Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
HMGL-like
Biotin_lipoyl
Biotin_lipoyl_2
RnfC_N
NQRA_N
HlyD_D23
GCV_H
53-BP1_Tudor
Motif
Other DBs
NCBI-ProteinID:
AIS18908
UniProt:
A0A089YR70
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Position
3680613..3682436
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AA seq
607 aa
AA seq
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MSNTPVSKRIFVTDTILRDAHQSLLATRMRTEDMLPICDKLDRVGYWSLEVWGGATFDAC
VRFLKEDPWERLRKLRQALPNTRLQMLLRGQNLLGYRHYSDDVVRAFVAKAADNGIDVFR
IFDAMNDVRNLRVAIEAVKAAGKHAQGTIAYTTSPVHTVAAFVAQAKQMEAMGCDSVAIK
DMAGLLTPYATGELVRALKAEQSLPVFIHSHDTAGLAAMCQLKAVENGADHIDTAISSFA
WGTSHPGTESMVAALKGSEFDTGLSLELLQEIGLYFYAVRKKYHQFESEFTAVDTRVQVN
QVPGGMISNLANQLKEQGALNRMNEVLAEIPKVREDLGFPPLVTPTSQIVGTQAFFNVLA
GERYKTITNEVKLYLQGGYGQAPGKVDEKLRRQAIGSEEVIDVRPADLLKPEMDKLRKDI
GELAQSEEDVLTFAMFPDIGRKFLEERAAGTLVPEVLLPIPEAGTQVARSGEGVPTEFVI
DVHGESYRVDITGVGVKAEGKRHFYLSIDGMPEEVVFEPLNEFVGGGIGKRKQASEPGHV
STAMPGNIVDVLVKQGDAVKAGQAVLITEAMKMETEVQAGVAGKVVAIHVAKGDRVNPGE
ILIEIEG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatactcctgtttccaagcgcatattcgtcaccgacaccattctgcgcgacgcg
catcagtcgctgctggcaacccgcatgcgcaccgaagacatgctgcccatctgcgacaag
ctcgaccgggtcggctactggtcgctggaagtgtggggcggcgccaccttcgatgcctgt
gtgcgctttctcaaggaagatccgtgggagcgcctgcgcaaactgcgccaggcgctgccc
aacacccgcttgcagatgctcctgcgcgggcagaacctgctcggctaccggcattacagc
gacgatgtggtccgggctttcgtggccaaggcggccgacaacggcatcgatgtattccgc
atcttcgatgccatgaacgacgtgcgtaacctgcgcgtggcgatcgaggccgtgaaggcc
gccggcaaacatgcccagggcaccattgcctacaccaccagcccggtgcacacggtcgcg
gcgttcgtcgcccaggccaagcagatggaagccatgggttgcgattcggtcgcgatcaag
gacatggccgggctgctgacgccctatgcgaccggcgagttggtcagggccttgaaggcc
gagcagtcgctgccagtgttcatccacagccatgacaccgcaggcctggccgcgatgtgc
cagctcaaggcggtggaaaatggcgccgatcatatcgacacggccatctccagcttcgcc
tggggcaccagccatccgggcaccgagtccatggtcgcggcgctcaagggcagcgaattc
gacaccggcctgagcctggagctgctgcaggagatcggcctgtatttctatgccgtgcgc
aagaaataccatcagttcgagagcgaattcacggcggtcgatacccgtgtgcaggtcaac
caggtgcccggcggcatgatttccaatttggccaaccagctgaaggagcagggtgcgctg
aaccgtatgaacgaggtgctggccgagatccccaaggtgcgtgaagacctgggcttcccg
ccgctggtcacacctacttcgcaaatcgtcggtacccaggcgtttttcaacgtgttagcc
ggcgagcgctacaagaccatcaccaacgaagtgaaattgtacctgcaaggcggttacggc
caggcgccgggcaaggtcgatgaaaagctgcgtcgccaggcgatcggtagcgaagaggtc
atcgacgtgcgtccggccgacctgctcaagccggagatggacaagctgcgcaaggacatt
ggcgagctggcccagtcggaagaagatgtgctgaccttcgccatgttccccgacattggc
cgcaagtttctcgaagagcgtgccgccggcaccctggtgcctgaagtgctgctgccgatt
cccgaggcgggaacccaggtcgcgcgcagcggggaaggggtaccgacagagttcgtcatc
gatgtgcacggcgaaagctatcgggtcgacatcactggggtcggggtcaaggccgaaggc
aagcggcatttctacctgtccatcgacggcatgcctgaagaagtggtgttcgagcccttg
aacgagttcgtcggtggcggtatcggcaaacgcaagcaggccagcgaaccgggccatgtc
agcactgccatgccgggcaatatcgtcgacgtgctggtcaagcagggcgatgcggtcaag
gctgggcaggcggtgttgatcaccgaggcgatgaagatggaaaccgaggttcaggccggt
gtggccggcaaggtcgtggccatccatgtggccaagggcgaccgtgtgaacccgggcgag
atattgatcgagatcgagggctga
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