Pseudomonas rhizosphaerae: LT40_17005
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Entry
LT40_17005 CDS
T03339
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh00300
Lysine biosynthesis
prh00470
D-Amino acid metabolism
prh01100
Metabolic pathways
prh01110
Biosynthesis of secondary metabolites
prh01120
Microbial metabolism in diverse environments
prh01230
Biosynthesis of amino acids
Module
prh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LT40_17005
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LT40_17005
Enzymes [BR:
prh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LT40_17005
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AIS18997
UniProt:
A0A089YX88
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Position
complement(3774007..3774837)
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AA seq
276 aa
AA seq
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MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLLVEAPSNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTAKKTIRVETKGGIITLDVRNDGQISVDM
GPPRLVPADIPFQADTQAHSYALSVDGQSVQIAALSMGNPHAVLRVDDINNAPVHALGPK
IEHHPRFPARVNVGFLHVVDRTRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LLDLPGGRLSIEWAGPGHSVIMTGPAVRVFEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctactgcgttttaccaagatgcatggtctgggcaacgatttcatggtgctggacctg
gtcagccagcatgcccacatcctgcccaaacacgccaagcaatggggcgatcgccacacc
ggcatcggcttcgatcagttgctgctggtggaagcgccgagcaatcccgacgtcgacttc
cgctatcgcatcttcaattccgacggctccgaagtggagcaatgtggcaacggcgcacgc
tgcttcgcccgcttcgtgctggacaagcgcctgacggccaagaagaccattcgcgtggaa
accaagggcggcatcatcaccttggacgtccgcaacgatggccagatcagcgtcgacatg
ggtccgccacgcctggtaccggccgatattccgttccaggccgacacccaggcgcacagc
tacgcgctgtccgtcgacggccagagcgtgcagattgccgcgctgtccatgggcaacccc
catgcggtgttgcgtgtggacgatatcaacaacgcgccggtgcacgcgctggggccaaag
atcgagcaccatccgcgctttccggcgcgggtcaacgtgggtttcctccacgtcgtggac
cgtacccgtgcccagttgcgggtgtgggaacgtggcgccggcgagacccaggcctgcggt
accggcgcctgcgccgctgcggtcgcggccatcagccagggctggatggactcgccgctg
ctgctcgacctgccgggcggccgcctgtccatcgaatgggccgggccgggccattcggtg
atcatgaccggccctgcggtgcgggtcttcgaaggacaagtgcgtttatga
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