Pseudomonas rhizosphaerae: LT40_17425
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Entry
LT40_17425 CDS
T03339
Name
(GenBank) AsnC family transcriptional regulator
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
prh
Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prh03000
]
LT40_17425
Transcription factors [BR:
prh03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
LT40_17425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
NirdL-like_HTH
HTH_11
HTH_20
HTH_Crp_2
HTH_IclR
HTH_1
Rrf2
HTH_5
MarR_2
HTH_23
Phage_rep_O
Sigma70_r4_2
MarR
HTH_29
TrmB
HTH_Tnp_ISL3
LexA_DNA_bind
DUF7343
Replic_Relax
wHTH-PRTase_assc
Motif
Other DBs
NCBI-ProteinID:
AIS19078
UniProt:
A0A089YRL2
LinkDB
All DBs
Position
3858843..3859313
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AA seq
156 aa
AA seq
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MQSPLDAYDRRILALLQEDATLSSAQIAEQVGLSQSPCWRRIQRLKEEGVIRAQVTLLDR
KKIGLNTQIFAEVKLNAHGRSNFTEFTEAIRGFPEVLECYVLMGNVDFLLRIVTPDIEAY
ERFFFEKLSMVPGIQEVNSTVALSEIKSTTSLPVDR
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcccgttggatgcttacgaccgacgtattctggcgttgctgcaagaagacgcc
acgctgtccagtgcacagatcgccgagcaggtgggcttgtcgcagtcgccgtgttggcgg
cgcatccagcggctcaaggaggagggggtgatcagggcccaggtgacgctgctggaccgc
aagaaaatcggcctgaacacgcagatattcgccgaggtgaagctcaacgcccacggccgc
tcgaatttcaccgagttcacggaagcgatacggggttttccagaggtgctggagtgctac
gtgctaatgggcaacgtcgattttctactccgtatcgtcacgccggacatcgaagcctac
gagcgcttcttcttcgagaagctgtcgatggtgccgggcattcaagaggtgaattcgacg
gtggcgctgtccgaaatcaagtcgaccaccagcctgccggtggatcggtga
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