Pseudomonas rhizosphaerae: LT40_18100
Help
Entry
LT40_18100 CDS
T03339
Name
(GenBank) lipid transporter ATP-binding/permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LT40_18100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prh02000
]
LT40_18100
Enzymes [BR:
prh01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
LT40_18100
Transporters [BR:
prh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LT40_18100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
nSTAND1
ABC_ATPase
AAA_30
AAA_29
DEAD
RsgA_GTPase
nSTAND3
NB-ARC
DUF3483
Motif
Other DBs
NCBI-ProteinID:
AIS19203
UniProt:
A0A089YRW7
LinkDB
All DBs
Position
4041147..4042955
Genome browser
AA seq
602 aa
AA seq
DB search
MSDSPRPAEQDSSLKIYLRLLSYVRPYVGMFLISIIGFVIFASTQPMLAGILKYFVDGLS
NPEAVLFPNVPYLRDLQLLQAVPILIVLIAAWQGLGSYLGNYFLAKVSLGLVHDLRVELF
NKLLVLPNRYFDTHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFIYLIWMNW
QLTLVMLAILPLIAVMVGSTSKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEGY
EQTRFAKASQGNTDKQLRMTKTGAIYTPMLQLVIYTAMAVLMFLVLYMRGDATAGDLVAY
ITAAGLLPKPIRQLSEVSSTVQKGVAGAESIFEQLDVAPELDTGTVERERVSGLLEVRNL
NFTYPGTDRQVLSDINFTAKPGQMIALVGRSGSGKSTLAGLIPRFYHHNEGEVLLDGVEI
ADYQLRNLRRHIALVTQSVTLFNDSVANNIAYGDLAGAPREDVVAAATDAYAKEFVDRLP
EGFDTQVGENGVLLSGGQRQRLAIARALLKNAPVLILDEATSALDTESERHIQAALDHVM
KGRTTVVIAHRLSTIEKADQILVMDQGRIVERGTHAQLLAQNGYYARLHAMGLDEPAKTD
IT
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattcaccgcgcccagcggaacaggattcaagcctgaaaatctatttgcgactg
ctcagctacgttcgcccctacgtgggcatgttcctgatcagtatcataggtttcgtgatc
ttcgcctctacccagcccatgctggccgggatcctgaagtacttcgtcgacggcctgagc
aatcccgaagcggtgttgttccccaacgtgccctacctgcgcgacctgcaactgctgcag
gcggtgccgatcctgatcgtgctgatcgccgcctggcagggcctgggttcctacctgggc
aactacttcctggccaaggtatcgctgggcctggtccacgacttgcgcgtggagctgttc
aacaagttgctggtgctgcccaaccgctacttcgacacgcacaactccggccacctgatc
tcgcgcatcaccttcaacgtgaccatggtcaccggcgctgcgaccgatgccatcaaggtg
gtgatccgcgaaggcctgacggtggtgttcctgttcatctacctgatctggatgaactgg
caactgaccttggtgatgctcgccatcctgccgctgattgcggtcatggtcggcagcacc
agcaagaaatttcgcaagcagagcaagaagattcaggtcgccatgggcgacgtgacccac
gtggcgtccgagaccatccagggctaccgcgtggtccgcagcttcggcggcgaaggctac
gagcagactcgtttcgccaaagccagccagggcaacaccgataagcaactgcgcatgacc
aagaccggcgccatctacacgccgatgttgcagctggtgatctacaccgccatggccgtg
ctgatgtttctggtgctgtacatgcgtggcgacgccaccgccggtgacctggtggcctac
atcaccgcggccggtctgctgcccaagccgatccgtcagctctcggaagtcagctccacg
gtgcagaaaggcgttgccggcgcggaaagcatcttcgagcagttggacgtggcccccgag
ctggacaccggcacggtggagcgcgagcgggtcagtggcctgctggaagtgcgcaacctg
aacttcacctaccccggtaccgatcgccaggtgctcagcgacatcaacttcaccgccaag
cctgggcagatgattgctctggtaggtcgctcaggcagcggcaagtcgaccctggccggg
cttattccacgcttctatcaccacaacgaaggcgaagtgctgctcgatggcgtggaaatc
gccgactaccaactgcgtaatctgcgtcggcacatcgcgctggtcacccagagcgtgacg
ttgttcaacgacagcgtggccaataacattgcctacggtgatctggccggcgcgccgcgc
gaggacgtagtggcggccgccaccgacgcctatgccaaggaattcgtcgatcgtctgccc
gaggggttcgacacgcaggtgggtgagaacggcgtgctgttgtccggtggccaacgtcag
cgcttggcgatcgcccgggccttgctcaagaatgcgcctgtgctgattctcgacgaagcg
acttcggcgctcgacaccgagtcggaacggcatatccaggcggcgctggaccatgtcatg
aaggggcgcaccacggtggtgattgcgcaccgactgtcgaccattgaaaaggccgaccag
attctggtgatggaccagggccgcatcgtcgagcgcggcacccacgcgcagctgctggcg
cagaacggctattacgccagactgcacgccatgggcctggacgagccggcaaagaccgac
atcacctga
DBGET
integrated database retrieval system
