Pseudomonas rhizosphaerae: LT40_18320 Help Entry LT40_18320        CDS       T03339                                  Name (GenBank) RNA polymerase subunit sigma-70   KO K03086   RNA polymerase primary sigma factor Organism prh  Pseudomonas rhizosphaerae Pathway prh02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:prh00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     LT40_18320  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:prh03021]     LT40_18320 Transcription machinery [BR:prh03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      LT40_18320 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_ner Sigma70_r1_1 Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 TMPIT Major_capside Pap_E4 Motif Other DBs NCBI-ProteinID:  AIS19240 UniProt:  A0A089Z0F4 LinkDB All DBs Position complement(4097595..4099439) Genome browser AA seq 614 aa AA seqDB search MSGKAQQQSRIKELITRGREQGYLTYAEVNDHLPEDISDPEQVEDIIRMINDMGINVFES APDADALLLAEADTDEAAAEEAAAALAAVETDIGRTTDPVRMYMREMGTVELLTREGEIE IAKRIEEGIREVMGAIAHFPGTVEHILSEYDRVTTEGGRLSDVLSGYIDPDDGIAPPAEV PPPVEKPAEKADAKDDEEEESDSDDEEETESGPDPVVAQQRFGAVSDQLAVTLKALKKHG RHSKQGIAEMLLLAELFMPIKLVPKQFEGLVERVRGALERLRQQERAIMQLCVRDARMPR ADFLRQFPGNEVDQTWSDALANGKAKYAEAIGRLQADIQRCQQKLSTLEAETGLTIAEIK DINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKF EYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPT PEELGERMEMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSTMQSPIDVATVES LKEATREVLGGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR HPTRSEHLRSFLDE NT seq 1845 nt NT seq  +upstreamnt  +downstreamnt atgtccggaaaagcgcaacagcaatctcgcatcaaagagttgatcacccgtggtcgtgag cagggttacctgacttacgcggaggtcaacgatcacctgcccgaggatatttcagatccg gagcaggtggaagacatcatccgcatgatcaacgacatggggatcaacgtattcgagagt gctccggatgcggatgcccttttgttggccgaagccgataccgacgaagcggcggccgaa gaggctgctgccgcgttggcagcggtcgagaccgacatcggtcgcacgaccgacccagtg cgcatgtacatgcgcgaaatgggtacggtcgagctgctcacgcgtgaaggcgaaatcgaa atcgccaagcgtatcgaagagggtatccgcgaggtgatgggcgcaatcgcgcacttcccc ggcacggtcgaacacatcctcagcgaatacgaccgcgtgaccaccgagggtggccgcctg tccgacgtgctcagtggctacatcgatccggacgacggcattgcgccgccggccgaggtg ccgccgccagtcgagaaaccggccgaaaaggccgacgccaaggatgacgaagaggaagag agcgacagcgacgacgaggaagagaccgagagcggtcccgacccagtcgtggcccaacag cgcttcggcgcggtgtccgatcaactcgccgtcaccttgaaagccttgaagaagcatggc cgtcacagcaagcagggcatcgccgaaatgctgctgctggccgagctgttcatgccgatc aagctggtgcccaagcagttcgaaggcctggtggaacgtgttcgtggtgcgctggagcgt ctgcgtcagcaggaacgcgccatcatgcagctgtgcgttcgcgatgcccgcatgccgcgt gccgacttcctgcgccagttccctggcaacgaagtcgaccagacctggagcgatgccctg gccaacggcaaggcgaagtacgccgaagccatcggccgcctgcaggccgacattcagcgt tgccagcagaagctgagcacgctggaagcggaaaccggcctgaccatcgccgagatcaag gacatcaaccgtcgcatgtcgatcggcgaagccaaggctcgccgggcgaagaaagagatg gtcgaagccaacctgcgcctggtgatctcgatcgccaagaagtacaccaaccgtggcctg caattcctcgatctgatccaggaaggcaacatcggtttgatgaaggcggtggacaagttc gaataccgtcgcgggtacaagttctcgacgtacgccacctggtggattcgtcaggccatc actcgctcgatcgccgaccaggcgcgcaccatccgtattccggtgcacatgatcgagacc atcaacaagctgaaccgcatttcgcggcagatgctgcaggagatgggtcgcgagcctacg ccggaagagctgggcgagcgcatggagatgcccgaggacaagatccgcaaggtcttgaag atcgccaaggagcctatctccatggagacgccgatcggtgacgacgaagactcccatctg ggtgacttcatcgaagactcgaccatgcagtcgccgatcgacgtggccaccgtggaaagc ctcaaggaagccacgcgcgaagtgctaggcggcctgacggcacgggaagccaaagtgctg cgcatgcgtttcggcatcgacatgaacaccgaccacaccctcgaggaagtcggcaagcag ttcgatgttacccgcgagcgtatccgccagatcgaagccaaggcgctgcgcaagctgcgc cacccgacgagaagcgagcacctgcgctccttcctcgacgaataa

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