Pseudomonas rhizosphaerae: LT40_19425
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Entry
LT40_19425 CDS
T03339
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh03030
DNA replication
prh03430
Mismatch repair
prh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LT40_19425
03430 Mismatch repair
LT40_19425
03440 Homologous recombination
LT40_19425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prh03032
]
LT40_19425
03400 DNA repair and recombination proteins [BR:
prh03400
]
LT40_19425
Enzymes [BR:
prh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LT40_19425
DNA replication proteins [BR:
prh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LT40_19425
DNA repair and recombination proteins [BR:
prh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LT40_19425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Cyanophycin_syn
Motif
Other DBs
NCBI-ProteinID:
AIS19443
UniProt:
A0A089YSP8
LinkDB
All DBs
Position
4314475..4315086
Genome browser
AA seq
203 aa
AA seq
DB search
MERIAVIDFETTGISPNMGCRATEIAVVMLERGEIVGRYQSLMNAGLPVPGFVASLTGIT
TAMVRKAPPAAEVMAEVAEFVGSTPLLAHNASFDQKFWDHELSLLRRERVQSFACSMLMA
RRLFPGAPNHKLGTLTQWAKLPHTGQAHRAMADAEMAANLTQHLALELRERHGLAEVSHG
LFCKLQKVPMAKMREALQKHRLG
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaacgcattgctgtcatcgacttcgaaaccaccggcatctcgccgaacatgggttgc
cgcgccacggaaatcgccgtggtcatgcttgagcgcggcgaaatcgtcgggcgctatcag
agcctgatgaacgccggcctgcccgtgcctggcttcgttgccagcctgaccggcatcacc
acggccatggtgcgcaaggcgccgccggcggccgaggtcatggccgaagtggccgagttc
gttggcagcacgccgttgctggcgcacaacgcctctttcgaccagaagttctgggatcac
gagctgagcctgctgcgccgcgagcgggtgcagagctttgcctgctcgatgctgatggcc
cggcgcctgttccccggcgcaccgaatcacaagctgggcaccttgacccagtgggcgaaa
ctgccgcacaccggccaggctcaccgggccatggccgatgccgagatggccgccaacctg
acccagcacctggcgctggagctgcgcgaacggcacgggctggccgaggtgtcccacggg
ttgttctgcaagttgcagaaagtgccaatggcgaagatgcgcgaggcgttgcagaagcat
cggttggggtag
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integrated database retrieval system
