Pseudomonas rhizosphaerae: LT40_19630
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Entry
LT40_19630 CDS
T03339
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
prh
Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prh03400
]
LT40_19630
DNA repair and recombination proteins [BR:
prh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LT40_19630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
AAA_22
GvpD_P-loop
SLFN-g3_helicase
RecA
AAA
Rad51
AAA_24
DUF7125
nSTAND3
AAA_14
NTPase_1
MCM
ABC_tran
AAA_29
PAXNEB
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AIS19481
UniProt:
A0A089ZRJ3
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All DBs
Position
4359749..4361116
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AA seq
455 aa
AA seq
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MAKAKRMYGCTECGATFPKWAGQCGECGAWNTLVETVIESGAAAPPSGRTGWAGQQAQLK
TLAEVSIEEIPRFSTASAELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIATRMP
ALYVTGEESQQQVAMRARRLGLPQDKLKVMTETCIETIIATAKVEHPKVMVIDSIQTIFT
ENLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAINELGVFGMTDKGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLSNPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALLAAIMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKANAPKEAPPGLQVIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggctaagcgcatgtacggctgcaccgagtgcggtgcgacgttccccaaatgg
gccggccaatgcggcgaatgcggcgcctggaacaccctggtggaaacggtcatcgaaagc
ggcgccgccgcgccgcccagcggccgcaccggctgggccgggcagcaggcccagctcaag
acactggccgaagtcagcatcgaggagatcccgcgcttctcgaccgcttccgccgaactg
gaccgcgtgctcggcggcggcttggtcgatggctcggtggtgctgatcggcggcgatccg
ggcatcggcaagtcgaccatcctcctgcagacgctgtgcaacatcgccacgcgcatgccc
gcgctgtacgtcaccggcgaagagtcgcagcaacaggtcgccatgcgtgcgcggcgcctg
ggtctgccgcaggacaagctcaaggtgatgaccgagacctgcatcgaaaccatcatcgcc
accgccaaggtcgagcaccccaaggtcatggtgatcgactcgatccagaccatcttcacc
gaaaacctgcagtcggcgcccggcggcgtgtcccaagtgcgtgaaagcgcggcgctgctg
gtgcgctacgccaagcagagcggtacggccatcttcttggtcggccacgtgaccaaggaa
ggcgccctggccggtccgcgcgtgctcgagcacatggtcgacaccgtgctgtacttcgaa
ggtgaatccgatggtcgtctgcgcctgctgcgggccgtgaagaatcgtttcggcgcgatc
aacgaactgggcgtgttcggcatgaccgacaagggcttgaaagaagtttccaacccttcg
gcgatctttctgacccgagcccaggaagaagtccccggcagcgtggtcatggccacctgg
gaaggcacccggccgatgctggtggaagtgcaggcgctggtcgacgacagccacctttcc
aacccccgccgggtcaccctgggcctggaccagaaccgcctggccatgctgctggcggtg
ctgcatcggcacggcggcatccccacccacgaccaggacgtgttcctgaacgtggtgggc
ggggtgaaagtgctggaaaccgcctccgacctggcgttgctcgcagcgatcatgtccagc
ctgcgcaatcgcccgttgcctcacgacctgctggtgttcggcgaagtgggtctgtccggc
gaggtgcgcccggttcccagtggccaggagcggctcaaggaagcggccaagcacggcttc
aaacgcgccatcgtgcccaaggccaacgcgccgaaagaggctccgccagggttgcaggtc
attgccgtgacacgtctggaacaggcgctggatgccttgttcgagtag
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