Pseudomonas rhizosphaerae: LT40_19850
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Entry
LT40_19850 CDS
T03339
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
prh
Pseudomonas rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prh03009
]
LT40_19850
Enzymes [BR:
prh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LT40_19850
Ribosome biogenesis [BR:
prh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LT40_19850
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TruB_N
Motif
Other DBs
NCBI-ProteinID:
AIS19524
UniProt:
A0A089YV88
LinkDB
All DBs
Position
4409093..4410055
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AA seq
320 aa
AA seq
DB search
MSEIIQLRAEVPSDLGGQRLDQVAAQLFAEHSRSRLSAWIKEGRLTVDGGVLRPRDTVHG
GALLELNAEQEAQGEWVAQDIELDIVYEDDQILVINKPAGLVVHPAAGHADGTLLNALLH
HVPDIINVPRAGIVHRLDKDTTGLMVVAKTIQAQTQLVSQLQSRSVSRIYECIVIGVVTA
GGKINAPIGRHGQQRQRMAVMEGGKQAVSHYRVLERFRSHTHVRVKLETGRTHQIRVHMS
HINFPLVGDQAYGGRFRIPPAASATMVDALKTFPRQALHARFLELDHPTTGERMGWESSL
PDDFVWLLSLLKQDREAFIG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagatcatacaacttcgcgcagaggtaccgtccgatttgggcggacaacgcctc
gaccaagtcgccgcccaattattcgctgagcactcgcgctcgcgcctttccgcctggata
aaggagggccgcctgaccgtggacgggggcgttctgcgcccgcgcgataccgtgcatggc
ggtgccctgctcgagctcaatgccgagcaggaagcccagggtgaatgggtggcccaggac
atcgagctggacatcgtctatgaagacgaccagatccttgtcatcaacaagccggccggc
ttggtggtccatccggccgccggccacgccgacggcacgctgctcaatgccctgctgcac
catgtgccggacatcatcaacgtgccgcgcgccggcatcgtccaccgcctggacaaggac
accaccggtctgatggtggtggccaagaccatccaggcgcagacccagctggtgtcgcag
ctgcagagccgttcggtcagccgcatctatgaatgcatcgtcatcggcgtggtcaccgcc
ggtggcaagatcaacgcgccgatcggtcggcacggccagcagcgccagcgcatggcggtg
atggaaggtggcaagcaggcggtcagccattaccgcgtgctcgaacgcttccgctcccac
acccacgtgcgggtcaagctggaaaccgggcgtacccaccagattcgtgtgcacatgtcg
cacatcaacttcccgttggtgggcgatcaggcctacggcggtcgcttccgcattccgcct
gcagccagcgcgaccatggtcgatgcactgaaaacctttccgcgccaggccctgcatgcg
cgcttcctcgagctcgatcatccgacgaccggcgagcgcatgggctgggaatcgtcactg
cccgacgacttcgtctggctgctgtcgctgctcaagcaggaccgcgaggccttcatcggg
tga
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