Pseudomonas rhizosphaerae: LT40_20340
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Entry
LT40_20340 CDS
T03339
Name
(GenBank) hypothetical protein
KO
K07347
outer membrane usher protein
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LT40_20340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prh02000
]
LT40_20340
02044 Secretion system [BR:
prh02044
]
LT40_20340
02035 Bacterial motility proteins [BR:
prh02035
]
LT40_20340
Transporters [BR:
prh02000
]
Other transporters
Pores ion channels [TC:
1
]
LT40_20340
Secretion system [BR:
prh02044
]
Chaperone-usher system
Type 1 pilus assembly protein
LT40_20340
Bacterial motility proteins [BR:
prh02035
]
Pilus system
Fimbrial proteins
LT40_20340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
AIS19611
UniProt:
A0A089ZRL9
LinkDB
All DBs
Position
complement(4502120..4504645)
Genome browser
AA seq
841 aa
AA seq
DB search
MLSPLPARAEGSLYFNPHALDARGGGVAADLDAFSRGEQLPGEYWVDIYLNHKRVGSRNV
TFVVEDNTLRPQLTVQELNDMGIHTQAFASLTTLDAQAIVTHPGKYIPEATTQFDFAKQR
LDIGVPQASLRFDARNAVDPSRWDPGLSAFVLNYNLTGARHRQDGHGVTDNAFLNLGTGI
NLGAWRLRNNSTYTYTQHKGRPGFQASEERLEDTLGQGSHRRWQSINTYAQRDIQRLGAR
LSLGEGSTSGTIFEAIQFRGAQLTSDDSMLPDSQRGFAPVVRGVADGSAQITVHQNGYMI
YQTYVAPGPYVIRDLYATAGSGDLQVTVREDNGKTRTYTQPYSSVPLMQREARLRYEFTG
GRYRSPYAGANEPSFGQASAAYGLSSATTVYGGVTGSADYASGLAGLGKSLGSLGSVSFD
ATQATARLQDKRTHRGQSYRVQYAKDLFQSGTTFTLAGYRYSTAGFYDFNEANEIAPGAT
DLGRWGYHKRSRVQVQLSQLLGEYGSLHVNAFQQDYWRMRGTERNASASYNVSLKNGVTL
GLTATHSITPGGHGSDRQYALGVQIPLSTLGSSWLTSSTQTGSRHGTSQSVAVNGQALEN
NNLNYAVRQSYGDQGKGHGGGTHATYKGTNGEVQAAYSYTGSSQQYSAGLRGGLIAHRYG
VTLSQPLGHTVTLVRAPGAAGVRVQNQPGIETDRRGYAVVPYATTYRENRVALWPETLDE
NVDLTDTVKTVVPTQGAVVLAEFETRIGSRVLVTLRTGNEFVPFGATATLFAEQDGTDNG
QAIGSGIVGARGELYLSGVPRKARVQVKWGTEAKQSCSAGLSLVDAPSAAWVKTLSAVCA
N
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaccgctgccggctcgcgcggaaggctcgctgtacttcaacccgcacgcgctg
gacgccaggggtggcggtgtggccgccgacttggatgccttttcacggggcgaacaattg
ccaggcgagtattgggtggacatctacctcaaccacaagcgagtcggtagccgcaacgtc
acctttgtcgtggaagacaacacactgcgcccacaattgacggtgcaagagctgaacgac
atgggcatccatacgcaagccttcgcatcgctgacgacgctcgatgcccaggccatcgtt
acccatccgggcaagtacattcctgaggcgacgacgcaattcgatttcgcaaaacagcgt
ctggacataggggtgccgcaggcctcactgcgtttcgatgcgcgcaacgccgtcgatccg
tctcgctgggatcctggcctgtccgccttcgtgctgaactacaacctgaccggcgcgcgc
catcgccaagacggccatggcgtcaccgacaacgctttcctgaacctgggtaccggaatc
aacctgggtgcatggcgtttgcgtaacaactcgacctacacctatacccagcacaaaggc
aggcctggttttcaagcaagcgaggaacgcctcgaggatacgctcggccagggcagccac
cgccgttggcaaagcatcaatacgtacgcccaacgcgatatccagcgcctgggagcccga
ctcagcctgggcgaaggcagcacctcgggcacgatattcgaagcgatccagttccgtggc
gcccagttgacctccgacgacagcatgctgcccgacagccagcgcggctttgcccctgtg
gtgcgaggggttgccgacggcagtgcgcagatcaccgtgcaccagaatggctacatgatc
taccagacctacgtggcgcctggcccctatgtgattcgcgacttgtatgcgacggccggc
tcgggcgacttgcaagtgaccgttcgcgaagacaacggaaaaacacgcacctatacccag
ccttactcctcggtaccgttgatgcaacgcgaggctcgcctgcgctacgaattcactggc
ggccggtatcgctctccctatgccggtgccaacgagccgagctttggccaggccagtgcg
gcctatggcttgagcagcgccactacggtctacggcggcgtcaccggcagtgcggattac
gcttcaggcctggccgggttgggaaaaagcctgggaagcctgggctcggtgtcgttcgac
gcgacccaggccactgcgcgcctgcaggacaaacgcacgcatcggggccagtcgtatcgc
gtgcagtacgccaaggacctgttccagagtggcaccacgttcaccctggccggctatcgg
tattccaccgctggcttctacgacttcaacgaagccaacgagattgcccccggcgcaacg
gatctcggccgctggggctaccacaagcgcagcagggtgcaggtgcagctcagtcagttg
ctgggtgaatacggcagcctgcacgtcaatgccttccagcaggattactggagaatgcga
ggcaccgagcgcaacgccagtgccagctacaacgtcagcctgaagaacggcgtcaccctg
ggactcaccgccacccactccatcacccccggcggccacgggtcggatcgacaatatgcc
ctcggcgtccagatacccttgagcaccctcggcagtagctggctgacctccagcacccag
accggcagccgccacggcacgtcgcaaagcgtcgccgtcaacggtcaggccctggaaaac
aacaacctgaactacgccgttcggcaaagctacggcgatcagggcaaaggtcacggaggc
ggtacccatgcgacctacaaagggaccaacggcgaagtgcaggccgcctacagctatacc
ggcagcagccagcaatacagcgctggcctgcgaggcggattgatcgctcatcggtatggc
gtgaccctgtcccaacctctgggtcacaccgtcaccctggtcagggcacccggtgcggcc
ggcgtgcgtgtgcaaaatcaaccgggtatcgaaaccgaccgccgtggttatgccgtggtg
ccctatgccaccacctatcgtgaaaaccgggtagcgctctggcctgagaccctggatgaa
aacgtggacctcaccgacacggtaaaaaccgtggtgcctactcaaggcgccgtggtgctc
gccgaattcgagacgcgcatcggcagccgggtgctggtgacgttacgaacgggcaacgaa
ttcgtacccttcggcgctacggcgacgttgttcgctgagcaagacggcacggacaacggg
caggcaatcggctccggcatcgtcggcgcacggggggaactgtacttgagcggcgtgccg
cgcaaggcacgggtgcaggtgaagtggggcaccgaagcgaagcagtcctgcagcgcggga
ttatcgctggtggatgccccatcggcggcctgggtgaagaccctcagtgccgtctgcgca
aactga
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integrated database retrieval system
