Pseudomonas rhizosphaerae: LT40_20935
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Entry
LT40_20935 CDS
T03339
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
prh
Pseudomonas rhizosphaerae
Pathway
prh00300
Lysine biosynthesis
prh01100
Metabolic pathways
prh01120
Microbial metabolism in diverse environments
prh01230
Biosynthesis of amino acids
Module
prh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
prh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LT40_20935
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
prh01002
]
LT40_20935
Enzymes [BR:
prh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LT40_20935
Peptidases and inhibitors [BR:
prh01002
]
Metallo peptidases
Family M20
LT40_20935
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
AIS19719
UniProt:
A0A089YVS2
LinkDB
All DBs
Position
complement(4632062..4633213)
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AA seq
383 aa
AA seq
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MTAAADLSPTLQLACDLIRRPSVTPVDADCQKLMMQRLGQAGFKLEPMRIEEVDNFWATH
GTQDGPVLCFAGHTDVVPTGPTQAWQIAPFEAVIDEHGMLHGRGAADMKGSLAAMLVAAE
RFVADHPNHRGSVAFLITSDEEGPAHHGTKAVVERLAARKERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGATLTVRGVQGHVAYPHLARNPIHLAAPALAELAAEHWDDGNAFFPPTSFQ
VSNLNSGTGATNVIPGELTAVFNFRFSTQSTVEGLQQRVATILDKHGLDWHIDWALSGLP
FLTEPGALLDAVAASIKDVTGRETQASTSGGTSDGRFIATLGTQVVELGPVNATIHQVNE
RILASDLDVLTEIYYQTLVELLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgccgccgacctctcgcccacgctgcagcttgcctgcgacctgatccgccgc
ccttcggtcacacccgtggacgccgattgccagaaactgatgatgcagcgcctggggcag
gccggtttcaagctggagccgatgcgcatcgaggaggtggacaacttctgggccacccat
ggcacccaggacggcccggtgctgtgcttcgccggccacaccgacgtggtccccaccggc
cccacccaggcttggcagatcgctccgttcgaggccgtcatcgacgagcacggcatgttg
catggccgtggcgccgccgacatgaagggcagcctggcggcgatgctggtggccgctgag
cgcttcgtcgccgatcaccccaaccaccgtggttcggtcgccttcctgatcaccagcgac
gaagaaggcccggcccaccacggcaccaaggcagtggtcgagcgcctggctgcgcgcaag
gagcggctggactggtgcatcgtcggcgagccttcgagcaccaccctggtcggtgatgtg
gtgaagaacggccggcgcggctcgcttggcgccaccttgaccgtgcgcggcgtgcagggc
catgtggcgtatccgcacctggcgcgcaacccgatccacctggcggccccggccctggcc
gagctggccgccgagcattgggatgacggcaatgcgttcttcccgccgaccagtttccag
gtgtccaatctcaacagcggcaccggcgccaccaacgtgattccgggcgagctgacggcg
gtgttcaacttccgtttctccacccagtccacggtcgaaggcctgcagcaacgtgtggcc
acgattctcgacaagcatggcctggactggcacatcgactgggcgctgtccggcctgccg
ttcctgaccgagccgggtgccctgctcgatgcggtagcggccagcatcaaggacgtcacc
ggccgcgagacccaggcctcgaccagcggcggcacctccgacgggcgcttcattgccacc
ctcggcacccaggtagtcgagttgggcccggtgaatgccacgatccaccaggtcaacgaa
cgtatcctggccagcgacctcgatgtgctgaccgagatctactaccagaccctcgtcgag
ttgctcgcctga
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