Phycobium rhodophyticola: N4R57_00040
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Entry
N4R57_00040 CDS
T11629
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
prhd Phycobium rhodophyticola
Pathway
prhd03030
DNA replication
prhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N4R57_00040 (dnaN)
03430 Mismatch repair
N4R57_00040 (dnaN)
03440 Homologous recombination
N4R57_00040 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prhd03032
]
N4R57_00040 (dnaN)
03400 DNA repair and recombination proteins [BR:
prhd03400
]
N4R57_00040 (dnaN)
Enzymes [BR:
prhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N4R57_00040 (dnaN)
DNA replication proteins [BR:
prhd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N4R57_00040 (dnaN)
DNA repair and recombination proteins [BR:
prhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N4R57_00040 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
UYV37559
LinkDB
All DBs
Position
complement(10028..11146)
Genome browser
AA seq
372 aa
AA seq
DB search
MKLSIERSVLLKAVAQAQSVVERRNTIPILANVLIEAEGSDVHFRATDLDIEVVDKAPAQ
VERAGATTVSAVTLHEIVRKLPDGALVTLSDDGTAGRLSVEAGRSHFNLATLPKEDFPVM
ASSEYSSNFSAPAPMLRRLFDKSKFAISTEETRYYLNGVYMHISDSDGGKVLRCVATDGH
RLARIDADLPDGAADMPGVIVPRKTVGELRKLLDNDETQIAVSVSETKIRFATPEITLTS
KVIDGTFPDYTRVIPSGNTRRLEVDAAEFAQAVDRVATVSSERSRAVKLSLDEDKLTLSV
NAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVDRENAVFMFNSAGDPTLMREGND
TSAVYVVMPMRV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcagcattgaacgcagcgtattgctgaaggctgtcgctcaggcgcagtccgtc
gttgaacggcgcaacaccatccctatcctcgccaatgtgctgatcgaggccgaaggctcc
gacgtgcatttccgcgccaccgaccttgatatcgaggtggtcgacaaagcccccgctcag
gtcgaacgcgccggtgccacaaccgtgtccgccgtcaccctgcacgagatcgtgcgcaag
ctgcccgatggcgctctggtcacactctccgatgatggcaccgccggtcgcctctcggtc
gaagcaggccgctcgcacttcaatcttgccaccctcccgaaagaagacttcccggtcatg
gcaagctcggaatacagctcgaacttctccgcgcccgcgccaatgctgcgccgcctgttc
gacaaatcgaaattcgccatttccaccgaagagacgcgctactacctcaacggcgtctat
atgcatatctccgattccgacggcggcaaagtgctgcgctgtgtcgccaccgatggccac
cgcctcgctcgaattgacgccgacctgcccgacggcgccgccgacatgcccggcgtcatc
gtgccccgcaaaacagtgggcgagctgcgcaaactgctcgacaatgacgaaacccagatc
gctgtgtccgtctccgaaaccaagatccgcttcgccacgccggaaatcaccctgacatcc
aaggtgatcgacggcactttcccggactacacccgggttattccttccggcaacacccgc
cgcctcgaagttgacgccgccgaatttgcccaagcggtggatcgtgtggccaccgtctct
tccgagcggtcgcgcgccgtgaaactctccctcgacgaggacaagctcacgctctcggtc
aacgctcccgacagcggcgccgccgaagaagaactcgcggtcgcctatggcgacgaacgt
ctcgaaatcggcttcaacgcgaaatacctgctggaaatcgcaagtcaggttgaccgcgaa
aatgcggtcttcatgttcaactccgccggcgacccgaccctgatgcgcgaaggcaatgac
acctccgccgtctatgtcgtcatgccgatgcgggtttga
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