Phycobium rhodophyticola: N4R57_05265
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Entry
N4R57_05265 CDS
T11629
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
Organism
prhd Phycobium rhodophyticola
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GFIT
Motif
Pfam:
DEAD_assoc
WHD_Lhr
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UYV38485
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Position
complement(1050527..1052941)
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AA seq
804 aa
AA seq
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MTALPSPLSDWFDARGWSAHPHQLEMLARADEPALLLIAPTGGGKTLAGFLPTLSELASE
PHKGLHTLYISPLKALASDIKRNLRTPVDEMGLPIRIDDRTGDTTATRKKAQRVDPPHIL
LTTPESLALLTSYPDAPHIFKGLQRVIVDEIHALAESKRGDQLFLALSRLQTLAPGLRRV
GLSATVDRPDDIAGLLACHPDPCAVICADPGPAPDIAMLDTAEAPPWSGGGAAYAIPAVL
EQVKAHKTTLIFHNTRAQAEIFFHNLWLANEDGLPIGIHHGSLDRAQREKVEAAMVRGDL
RAIVCTGSLDLGLDWGDVDLVIQVGAPKNVKRLVQRIGRANHRYNAPSKALLVPANRFEV
IECHAALAAARENDLDGDPRGSGPLDVLCQHILIAACSGPFTDDKLFSEIVSAGPYVTLS
RDTFDACLDFVATGGYAFRTYDRWQRLQERNGAWQLRDPRAAARIRMNIGTIQDADLLKV
RMRGRGPALGEVEEAFAASLSQGDTFLIGGKIVRYEGLKEMTVEVSRDKGRKPKLAVFSG
TKFATSTQLSQRVLRMFKQRDWPELPDHTREWLHLQTRVSSLPQPGRLLVESFPHDGREH
ICVYGFAGKNAQQTLGLLLTKRMEEMGLAPLGFVATDYATLIWGLDPIDDAAPLFDLARL
RDGLDGWLAGNAVMKRTFRGVATIAGLIERNMPGQRKTGRQATFSSDILYETLLKYDADH
LLMQVTRTEAMRGLVDFARIEDMARRVHGRIETTRLDRVTPLAAPLFLEVGKVPVQGEAE
ERLLKQETERLMQAAGLARPDPHL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgacagccctgccttcccctctttctgattggtttgatgcccgcggctggtctgcgcat
cctcatcagcttgagatgttggcacgcgccgatgaacctgcgctgcttttgatcgcgccg
actggcggtggcaaaacgcttgcaggctttctgccaaccctttccgagttggcctctgaa
ccgcataagggcttgcatacgctctatatttcgccgctcaaagccctcgcatcggacatc
aaacgcaaccttcgcaccccggttgacgagatggggctacccatccgaattgacgatcgc
accggcgacaccaccgcaacccgcaagaaggcacagagagtcgatccgccgcatattctc
ctcaccacgccagaaagccttgcgcttttgacctcctaccccgacgcgccgcatattttc
aaagggttacaacgcgttatcgtcgatgaaatccatgcgctggctgaatccaaacgcggc
gatcagctgtttctcgccctgtcgcggctgcaaaccctcgcgcccggactgcggcgcgtc
gggctctcggcgacggtcgaccgaccggatgacatcgccggtcttctggcctgtcatccc
gatccctgcgcagtaatttgtgccgaccctggtcctgcccccgacatcgccatgctagac
accgccgaagcaccgccatggtcgggcggcggcgcggcttatgcgatccccgcggtgctt
gagcaggtcaaggcgcacaagaccacactgatctttcacaacacccgcgcgcaggcggaa
attttctttcataatctgtggcttgccaacgaagacggcctacccatcgggatccatcat
ggctctctcgaccgggcccagcgtgaaaaagtcgaagccgccatggtgcgcggcgacctg
cgcgccatcgtgtgtaccggcagcctcgatctcgggctcgattggggcgatgtggacctt
gtcattcaggtcggcgcgcccaaaaacgtcaagcgcctcgtccagcggattggccgcgcc
aatcaccgctacaacgcaccctccaaggcgcttctggtgcccgccaaccgctttgaggtc
atcgaatgccatgccgcccttgcagcggcgcgtgagaacgatcttgatggcgacccgcgc
ggcagcggaccgcttgacgtgctctgccagcatatcctcatcgcggcctgttccggtccg
tttaccgacgataaactattttctgagattgtgagcgctggcccctatgtgaccctgtca
cgtgacacttttgacgcctgtctcgatttcgtcgcgaccggcggttatgcttttcgcacc
tatgaccgctggcaaaggttacaggagcgcaacggcgcctggcaattgcgtgacccccgc
gccgccgcgcgtatccggatgaatatcggcaccattcaggatgccgacctgctaaaagtg
cgcatgcgcgggcgcggtcccgctctgggcgaggttgaagaggcatttgccgcctcgctt
tcccaaggcgatacattccttatcggcggtaaaatcgtgcgatacgaaggcctgaaggaa
atgacagttgaggtctctcgcgataaggggcgcaagccgaaacttgctgttttctcaggc
acgaaattcgccacctcaacccagctgtcacagcgcgtcttgcggatgttcaaacagcgc
gactggcccgaattgcccgaccatacccgcgagtggctgcacctccagacccgcgtttcc
agcctgcctcagccggggcgtttgttggtcgaaagcttccctcatgacggacgagagcat
atttgcgtctatggatttgcgggcaagaatgcccaacaaacattgggccttttgcttacc
aaacggatggaggaaatgggcctcgccccactcggctttgtcgcgacggattatgccacg
ctcatctgggggcttgacccgatcgacgatgccgcgccgctgtttgacctcgcgcgcttg
cgcgacgggcttgacggttggctcgccgggaatgccgtcatgaaacgcacctttcgcggc
gtggccaccatcgccgggctgatcgaacgcaacatgccgggacagcgcaaaaccgggcgg
caggctacgttttcctcggacatcctttatgaaacgctgctgaaatacgacgccgatcac
ctgctgatgcaagtcacccgaaccgaagccatgcgcggccttgtcgatttcgcaaggatc
gaggacatggcccgccgggttcacgggcgcatcgaaacgacccgtcttgaccgcgtcacc
cccttggccgcaccgctgttcctcgaagttggcaaggtcccggttcaaggcgaagccgaa
gagcgcctgctcaaacaagagaccgagcgcctgatgcaggccgccgggttggcccggcct
gatccacatctgtaa
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