KEGG   Phycobium rhodophyticola: N4R57_09655
Entry
N4R57_09655       CDS       T11629                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
prhd  Phycobium rhodophyticola
Pathway
prhd02020  Two-component system
Brite
KEGG Orthology (KO) [BR:prhd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    N4R57_09655
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:prhd02022]
    N4R57_09655
Two-component system [BR:prhd02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   N4R57_09655
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 AAA_2 FleQ cREC_REC AAA VpsR AAA_16 MCM OKR_DC_1_N nSTAND3
Other DBs
NCBI-ProteinID: UYV39239
LinkDB
Position
complement(1958018..1959439)
AA seq 473 aa
MSDILIVDDERDIRELISDILEDEGYTTRLAGNSDDAMSEINAEQPALLILDIWLKDSRM
DGIDILKAVKRDNPDVPVVIISGHGNIEIAVAAIKQGAYDFIEKPFNIDQLLVVIRRAME
TSRLRRENSQLKRKDTTNAEMIGNSAAYRTLVGQLDKVTKSNGRVMLSGPSGVGKEIAAR
YIHAQSNRKSAPFVVVGCASIEPDRMEEVLFGRESAERGIEPGLLEEANGGVIYFDEVAD
MPPGTQSKILRVLVDQQFLRVGGADKVRVDLRVISSTSRDLQAEIAADRFREELYHRLNV
VPIEVPSLEERREDIPLLAEHFIADFNQTQGLPLRQMSEEAITLMQTMTWPGNVRQLRNV
IERLLILGDSSGEIEARELPSEDEPAQEDGRVVLSGVLATLPLREAREAFEREYLLTQIN
RFGGNISRTAQFVGMERSALHRKLKSLGVVTTNKSGARVATVDEAATEESEEG
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgagtgacattctgatcgtcgatgatgagcgcgacatccgcgagttgatctcggatatt
ctcgaagacgaagggtataccacgcggcttgcgggcaactccgatgacgcgatgagcgag
atcaacgccgagcaaccggctttgttgatccttgatatctggctcaaggacagccggatg
gacgggatcgacatcctcaaggcggtcaaacgcgacaacccggatgtgccggtggtcatt
atttccggccacggcaatatcgaaatcgcggtcgcggcgatcaaacagggggcgtatgat
ttcatcgagaagcctttcaacatcgaccaattgcttgtggtgatccgccgtgccatggaa
acctcgcgcctgcgccgcgagaattcacagctcaagcgaaaagacaccacaaacgccgag
atgatcggcaattccgccgcctatcgcacgcttgtgggacagcttgacaaggtcaccaaa
agcaatggccgcgtgatgctttccgggccgtccggcgtgggcaaggaaatcgccgcgcgc
tatattcatgcccagtccaaccgcaaatccgcgccttttgttgtggtcggctgtgcctcg
atcgaacctgaccgcatggaagaggtgctttttggccgcgaaagcgccgaacgcggcatt
gaacccggcctgcttgaagaagccaacggcggggtgatctattttgacgaggtggccgat
atgccacccggcacgcaatccaagatcctgcgggtgctggtcgatcagcaattcctgcgg
gtgggtggcgctgacaaggtgcgcgtcgatctgcgggtgatctcttcgacctcgcgcgac
ctacaagccgaaatcgccgccgaccgcttccgcgaggaactgtaccaccggctcaatgtg
gtgccgattgaggtgccatcgctggaggagcggcgcgaggatattccgcttctggcggaa
catttcatcgccgatttcaatcagacccaaggcctgccgctgcgccagatgtccgaagag
gcgatcacgctgatgcagaccatgacctggcccggcaacgtgcgccagctgcgcaatgtg
atcgagcggcttttgatccttggcgacagctcgggcgagatcgaagcgcgcgaactgccg
tccgaggacgaacccgcccaagaggacggtcgcgtggttctgtccggtgtgctggccacc
ttgccgctgcgcgaagcgcgcgaagcgtttgagcgcgaatacctgctgacgcagatcaac
cggtttggcggcaatatttcgcgcaccgcgcaatttgtcgggatggagcgttcggccctg
caccgcaagctcaagtcgttaggtgtggtgaccaccaataaatccggcgcgcgtgtcgcc
acagtggacgaagcggccacggaagagtccgaggagggttaa

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