Phycobium rhodophyticola: N4R57_15220
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Entry
N4R57_15220 CDS
T11629
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
prhd Phycobium rhodophyticola
Pathway
prhd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prhd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
N4R57_15220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prhd03021
]
N4R57_15220
03400 DNA repair and recombination proteins [BR:
prhd03400
]
N4R57_15220
Enzymes [BR:
prhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
N4R57_15220
Transcription machinery [BR:
prhd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
N4R57_15220
DNA repair and recombination proteins [BR:
prhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
N4R57_15220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-ProteinID:
UYV36356
LinkDB
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Position
complement(3073220..3074236)
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWQELIKPTQLDVKPGNDPTRQATIVAEPLERGFGLTLGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVSVRMEVEGPKRLSVNAKGPGVVTAGDIAD
SAGIEILNREHVICHLDEGADLYMELTVNTGKGYVAAEKNKPEDAPIGLMPIDAIYSPVK
RVSYDVQPTREGQVLDYDKLTLKIDTDGSITPDDALAFAARILQDQLGIFVNFDEPEAAG
RQEEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDAF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccataagaattggcaggaactgatcaagcccacgcagcttgacgtgaaaccgggc
aatgacccgactcgtcaggcaaccatcgtggccgaaccgcttgagcgcggctttggtctc
acgctgggcaacgcgctgcgccgggttctgatgagctcgctacagggtgccgcgatcaca
agcgtgcaaatcgacaacgtgctgcacgaattctccagcgttgccggcgtgcgtgaagac
gtgaccgacatcgttttgaacctcaaaggtgtctccgtgcgcatggaagtcgaagggccc
aagcgcctttcggtcaatgccaaggggccgggtgttgtcactgctggtgatatcgccgac
agcgcgggcatcgagatcctcaaccgcgaacatgtaatctgccacctcgatgagggcgcg
gatctctacatggaactgacggttaacaccggcaaaggctatgtcgccgccgagaaaaac
aaacccgaagacgcgcccatcggcctgatgccgatcgatgcgatctactcgccggttaaa
cgcgtctcctatgacgtgcagccgacgcgtgaggggcaggttctcgactatgacaagctg
accttgaaaatcgacaccgacggttcgatcacccctgacgatgctctggccttcgccgcg
cgcatccttcaggaccagctcggcatcttcgtcaacttcgacgagcccgaagccgctggc
cgtcaggaagaagacgatggtctcgaattcaacccgctgctgctcaagaaagtggacgag
ttggaactgtctgttcgttcggcaaactgcctcaagaacgacaacatcgtttatatcggc
gacctgatccagaaaaccgaagccgagatgctccgcaccccgaacttcggccgcaagtcg
ctcaacgagatcaaggaagtgctctcgggcatgggtctgcatctcggtatggacgtcgaa
gactggccgccagacaacatcgaagatctggccaagaaattcgaagacgcgttctga
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