Porifericola rhodea: PZB74_04270
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Entry
PZB74_04270 CDS
T09201
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
prho
Porifericola rhodea
Pathway
prho03030
DNA replication
prho03430
Mismatch repair
prho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PZB74_04270
03430 Mismatch repair
PZB74_04270
03440 Homologous recombination
PZB74_04270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prho03032
]
PZB74_04270
03400 DNA repair and recombination proteins [BR:
prho03400
]
PZB74_04270
Enzymes [BR:
prho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PZB74_04270
DNA replication proteins [BR:
prho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PZB74_04270
DNA repair and recombination proteins [BR:
prho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PZB74_04270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
DEDDh_C
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WKN32559
LinkDB
All DBs
Position
1030154..1031095
Genome browser
AA seq
313 aa
AA seq
DB search
MDFVALDFETANHQRESVCEIGIAIVEGGSVQEQKSWLVKPRNNWFNSMNTRIHGIDAAK
VAMEPEFDEIWQQVGHYFDGANVVAHNASFDLSVLRHVLSQYDIPFPDLNYACSLQVARR
AWRGFHSYGLSALSERFGISLNHHAAGSDAEASAHIMLKAFSDHGLSKFEDIEEAFGLRV
GKLYAHGYIPSGRIRPQKKKKPNLQSMTLDLSKVSKSHPLYGKSVVFTGSLKSMSRAEAQ
KCVIEAGGHSTNFVDDRTNYLVLSERIFLNIENGVSNNKVKQARSLSSQGTQVCLISENE
FLNLLSYEVSGEA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtggcattggattttgagacagccaaccaccagcgagagagtgtttgtgaa
attggtattgctatcgtagaaggcggtagtgtacaggagcaaaagtcgtggctggtgaag
cctcgcaacaactggtttaacagtatgaatacccgtatccatggtatagatgcggcaaaa
gtggctatggagcctgagtttgatgagatatggcagcaggtgggccattattttgatggg
gcaaatgttgtagcacataatgccagttttgatcttagcgtgctgcgtcatgtgcttagc
caatacgatattccttttcctgatcttaactatgcctgtagtttgcaggtggccagacgg
gcctggcgaggctttcactcctacgggcttagcgccctttccgagcggtttggtatttct
ctaaaccaccacgctgccggctctgatgctgaagccagtgcccatattatgctgaaggcg
ttctccgatcatggcttatcaaagtttgaagatattgaggaggcttttggcctgcgggta
ggaaagctttatgctcacggttatatcccttccggccgtatccgtccacaaaaaaagaaa
aagcccaacttacaaagcatgacgctggacttgtccaaagtcagtaagtcgcaccccctc
tatggcaagtcagtggtttttaccggctcactcaaaagtatgtcgagggcagaggcgcaa
aaatgtgtgatagaagccggtggacactctaccaattttgtagatgaccgtaccaactac
ctggtgctgagcgaacgcatctttttaaatatagaaaacggggtaagtaataataaagtc
aaacaggccagaagtctttcttcgcagggtactcaggtctgccttatttctgaaaacgag
ttcttaaatctgctgagctatgaagtatcaggagaagcttaa
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