Porifericola rhodea: PZB74_05105
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Entry
PZB74_05105 CDS
T09201
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
prho
Porifericola rhodea
Pathway
prho03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PZB74_05105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prho03400
]
PZB74_05105
Enzymes [BR:
prho01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PZB74_05105
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PZB74_05105
DNA repair and recombination proteins [BR:
prho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PZB74_05105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
WKN32722
LinkDB
All DBs
Position
complement(1245325..1246113)
Genome browser
AA seq
262 aa
AA seq
DB search
MPELPEVATFEKYLRHTALHKKITEVEVEDERVVLCTADELREGLIGQTFEQTQRIGKHL
LISLSSGQYLSMHFGMTGRLRYFKDREDTPRFTKVLFSLEDGYHLSYVCPRILGRLGLTS
DVQAYSKKKKLGEDALKISHESFAKKLKKRKGLIKPILMNQSVVAGLGNWIVDDMLYQTG
LHPETPMVALEETHIKSLYDKMQYIIRTAIDLETRYDEFPKHFLITHREEGAKSTLYDGD
IIRMVVNGRGTYICPVGQKLKV
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattaccagaagtagccacctttgagaagtatttaagacatacggcattgcac
aaaaaaattacagaggtagaagtagaagatgaaagagtggtactttgcacagctgatgag
cttcgtgaaggactaattggccagacatttgagcaaacccaacgcattggtaagcacctg
ctgatcagccttagcagtggtcagtatctgagtatgcatttcgggatgactggtagactg
agatattttaaagacagagaagatacaccacgctttacaaaagtactgttttctctggag
gatggttaccacctcagctatgtatgtccccgtatattgggtcgcctgggccttacctca
gatgtacaggcttacagcaaaaaaaagaaacttggagaagatgcactcaagattagtcat
gaaagctttgctaaaaagctaaaaaaaaggaaaggcctgataaaacctatactgatgaac
cagagtgtagtggccggcttaggtaattggattgtagacgatatgttataccagaccggg
ttgcaccctgaaacaccaatggttgccctcgaggaaacacacattaaatcgctgtacgac
aagatgcagtacatcatcaggacggcgatagatcttgaaacacgctatgatgaatttcct
aagcactttttgattactcaccgggaggaaggagctaaaagtacgctttacgatggcgat
attatccgtatggtagttaatgggcgtggcacctacatttgtccggtaggtcaaaaactg
aaggtataa
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integrated database retrieval system
