Porifericola rhodea: PZB74_05595
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Entry
PZB74_05595 CDS
T09201
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
prho
Porifericola rhodea
Pathway
prho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PZB74_05595 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prho03400
]
PZB74_05595 (ruvB)
Enzymes [BR:
prho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PZB74_05595 (ruvB)
DNA repair and recombination proteins [BR:
prho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PZB74_05595 (ruvB)
RecFOR pathway proteins
PZB74_05595 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
NB-ARC
AAA_3
AAA_22
nSTAND3
AAA_16
Mg_chelatase
AAA_14
NPHP3_N
TIP49
RNA_helicase
NTPase_1
ResIII
Bac_DnaA
Rad17
MCM
Sigma54_activ_2
AAA_PrkA
bpMoxR
DUF815
TsaE
AAA_33
ABC_tran
NACHT
AAA_24
AAA_28
AAA_18
AAA_11
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
WKN32817
LinkDB
All DBs
Position
1364169..1365200
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AA seq
343 aa
AA seq
DB search
MREDYLRGDADHLSPGERELEKALRPLSFDDFTGQSKIIENLKVFVLAAKKRGDQLDHVL
LHGPPGLGKTTLSHIIANELESQIKATSGPVLDKPSDLAGLLTNLDAGDVLFIDEIHRLN
PIVEEYLYSAMEDFKIDIMLDSGPNARTVQISLSPFTLVGATTRSGLLTSPLRARFGINA
RLEYYDAELLQSIVKRSASILNTPIHEEAAHEIARRSRGTPRIANTLLRRTRDFAEIKGE
GIITKPIAEMALKALDVDQNGLDDMDNRILSTIIEKFKGGPVGISTIATACGEEAETIEE
VYEPFLIKEGYIKRTSRGREATELAYRHLKLIPPGRAQTLFDE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagattatttaagaggcgatgccgatcatcttagtcctggcgaacgtgaattg
gaaaaagcgctccgccccctaagttttgatgactttaccggtcagtctaaaattatagaa
aaccttaaggtatttgtactggctgctaaaaagcgtggcgaccaactggaccatgtgctt
ttgcatggccctcccggcctgggaaagaccaccctttctcatattattgccaatgaactg
gagtcgcagattaaagctacctctggcccggtactggataaacccagcgaccttgccgga
ctattaacaaatctggatgccggcgatgttttgtttattgacgaaatacaccggcttaac
cctattgtggaagagtacctatactctgccatggaagatttcaagattgatattatgctt
gactccgggcccaatgctcgtacagtgcagattagccttagcccttttacgctggtagga
gccactacacgttcgggtctgcttacctcacctctaagggctcgctttggcattaatgct
cgcttggaatattatgatgcggaactactacaaagcatcgttaaacgttcggccagtata
ttaaacacccctattcatgaagaggcagcccacgaaattgctcgccgtagccgcggtacc
ccgcgtattgccaatacgctactacgccgtacccgcgactttgccgaaattaagggggaa
ggtattattactaaacccattgcggaaatggctcttaaagccctggatgtagaccagaac
ggcctagatgacatggataaccgcattctttctaccattattgaaaagtttaaaggagga
ccggtaggcattagtactattgctaccgcctgtggagaagaagcggaaactatagaagaa
gtgtatgagccttttctcattaaggagggctacatcaaaagaacttctcgtggaagagaa
gctacagaactggcttacagacatcttaagctcatccccccgggcagagcacaaacattg
tttgacgaataa
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