Porifericola rhodea: PZB74_08330
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Entry
PZB74_08330 CDS
T09201
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
prho
Porifericola rhodea
Brite
KEGG Orthology (KO) [BR:
prho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prho03032
]
PZB74_08330
03036 Chromosome and associated proteins [BR:
prho03036
]
PZB74_08330
03400 DNA repair and recombination proteins [BR:
prho03400
]
PZB74_08330
DNA replication proteins [BR:
prho03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PZB74_08330
Chromosome and associated proteins [BR:
prho03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PZB74_08330
DNA repair and recombination proteins [BR:
prho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PZB74_08330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
RA_2
Plug
RecA-like_ORC2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
WKN33340
LinkDB
All DBs
Position
complement(2033581..2033886)
Genome browser
AA seq
101 aa
AA seq
DB search
MTKAEVVQQIADKTGIDKADVYTTIEAFFSVVKNSMSSGENIYIRGFGSFVNKKRARKVG
RNISKNTAIIIDEHYVPSFKPAKVFQEKVKNSEKLKELETN
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
gtgactaaagcagaagtagttcagcaaattgctgacaaaacaggtattgataaagcagat
gtatacactaccattgaagctttttttagcgtagtcaaaaactccatgtctagtggtgag
aatatctatattagaggttttggaagttttgtcaacaaaaaaagagcccgcaaagtaggt
agaaatatttcaaaaaacactgctattatcatagacgaacactacgttcccagttttaag
cccgccaaagtatttcaggagaaggtaaaaaatagcgaaaagcttaaagaattagagact
aattaa
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