Porifericola rhodea: PZB74_14060
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Entry
PZB74_14060 CDS
T09201
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
prho
Porifericola rhodea
Pathway
prho00300
Lysine biosynthesis
prho00470
D-Amino acid metabolism
prho01100
Metabolic pathways
prho01110
Biosynthesis of secondary metabolites
prho01120
Microbial metabolism in diverse environments
prho01230
Biosynthesis of amino acids
Module
prho_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
prho00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PZB74_14060 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PZB74_14060 (dapF)
Enzymes [BR:
prho01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PZB74_14060 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
WKN30085
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Position
3420902..3421678
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AA seq
258 aa
AA seq
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MNTLRFYKYQGTGNDFVMIDNREGVFPQNNEQLIQRLCDRKFGVGGDGLILLQDHDDYDF
EMVYYNADATPSMCGNGSRCAVHLAHHLGMIGKHSQFMAEDGMHDATIDNGQIHIRMVDV
VGIEELEGGYFLNTGTRHYVRLVEDVAGFDVVGEGKKIRYHQTFMPEGTNASFTKVDNGE
VQMRIYEKGVEDETLSSGTGVTAVALALAKVKGLQSPVKINTRGGELQVSFRKVKEDFYT
DVHMIGPAVMVFEGTVFV
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaacacattacgcttttataaatatcagggaacaggaaatgacttcgtcatgattgat
aatcgtgaaggtgtttttcctcaaaataatgagcaactgattcaacgcctctgcgaccgc
aagtttggagtaggaggggatggacttatccttttgcaggatcatgatgactacgatttt
gaaatggtgtattataacgcggacgctacgcctagcatgtgcggtaatggtagtcgttgt
gctgtacatctggcacatcatctgggcatgattggcaagcactcgcagtttatggctgaa
gatggaatgcatgatgctactattgataatgggcagatccatattcgtatggtagatgtg
gtaggcatagaagagctggaaggaggttactttttgaatactggcacgcgtcattatgtc
aggctggtagaagatgtggcaggttttgatgtagtgggcgaaggaaaaaaaattcgttat
catcagacatttatgcctgaaggaaccaatgccagttttactaaagttgataatggtgag
gtgcaaatgcgtatctacgaaaaaggtgtagaggatgagacattatcttccggaacgggc
gtaactgccgtagccttagcattagccaaagttaaagggctacagagcccggtaaaaata
aacaccagaggaggagaacttcaggtttcttttagaaaggtaaaagaagatttttatact
gatgtgcatatgattggcccggcagtcatggtttttgagggcactgtttttgtgtga
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