Porifericola rhodea: PZB74_18560
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Entry
PZB74_18560 CDS
T09201
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
prho
Porifericola rhodea
Pathway
prho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PZB74_18560 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prho03019
]
PZB74_18560 (recQ)
03400 DNA repair and recombination proteins [BR:
prho03400
]
PZB74_18560 (recQ)
Enzymes [BR:
prho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PZB74_18560 (recQ)
Messenger RNA biogenesis [BR:
prho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PZB74_18560 (recQ)
DNA repair and recombination proteins [BR:
prho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PZB74_18560 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
RecQ-1-like_HTH
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
WKN30960
LinkDB
All DBs
Position
4535681..4537876
Genome browser
AA seq
731 aa
AA seq
DB search
MVEQQTNLKAYLKQYFGYSQFRGNQEAIIRNILNRNNTFVIMPTGAGKSLCYQLPAIIQE
GTAIVISPLIALMKNQVDQLNALNINAQFLNSTLNKSEMNRVKKGTLSGDVKLLYVAPES
LTKEENIKFLQEAKISFVAVDEAHCISEWGHDFRPEYRRIKTIIGQLGDNVPVIALTATA
TPKVQLDIQKNLQMEDADLFKSSFNRENLYYEVRPKKQAKKQLIQFIKQHKGKSGIIYCL
SRKKVEEIAEFLKVNDINAAPYHAGLEPSVRMRNQDAFLNEDVDVIVATIAFGMGIDKPD
VRFVIHYNVPKSLEGYYQETGRAGRDGLEGKCLMFYSYNDILKLEKFNKDKPVTERDNAR
MLLHEMISYSESSVCRKRQLLHYFGENLREDCGYCDNCLNPKEQYEGQTYVETVLQTAQQ
TGERFGIQHLVAVIRGSENQYVLSYDHNKLSVYGKGKEENDFFWNSVVRQTLLFEFLEKD
IENIGSLKLTDKGREFILNPHSISLSKDHVYEDLGEEEEFEGNNASAGHNGGSKSYDQSL
FDILKKLRKEVSKKKNVPPYVVFQEPSLEEMATTYPTSKDELAAINGVGMGKVMKFGAPF
IEAISKYVEENDIVTAADVVIKSAVNKSKNKIFIIQQIDKKVDLEEIAESRSISMDELLD
EIELICYSGTKLKLDYYIDQILDEDQQDDLYDYFLSADSDSIELALEEFGSDYSEEELRL
MRVKFMSEYAN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggtggaacagcaaactaacctaaaagcttatcttaagcagtattttgggtacagtcaa
ttcagaggaaatcaggaggcaattataagaaatatactaaacagaaataatacttttgtt
atcatgcctacaggagccggtaagtctctatgttaccaactaccggccatcattcaggaa
ggaactgcgatcgttatatctcccctcatcgccttgatgaaaaaccaggttgaccagctt
aatgctttaaatattaatgcacaattccttaactccacgctcaacaaatcagagatgaac
cgcgtgaaaaaaggtacacttagcggagatgttaagctcttgtatgttgctccagagtca
cttactaaagaagaaaatattaaattccttcaggaagctaaaatttcttttgtagctgtg
gatgaagctcactgtatttctgagtggggccacgacttccgacctgagtatagaagaatt
aaaactattattgggcagttgggcgataacgtacccgtaattgctttaaccgctacagct
acacctaaagtacagctggatattcaaaagaatctccagatggaagatgccgaccttttt
aagtcatcatttaatcgtgaaaacttatattatgaggttcgccccaaaaaacaggcaaaa
aagcagcttatccagtttataaaacaacacaagggtaagtctggcatcatctactgcctc
agcagaaagaaagtagaagaaattgctgagtttcttaaagtgaatgacatcaatgctgcg
ccttatcacgcaggtttggaaccttcggttcgtatgcgcaatcaggatgcgttccttaat
gaggatgtagacgtaatagtggctaccatcgctttcggcatgggtatagacaagcccgac
gtacggtttgtcattcactataatgtacccaaatctctggaaggatactatcaggaaact
ggccgtgccggtcgtgatggtttagagggtaagtgtttaatgttctacagctataacgat
atccttaagctggagaaattcaacaaagacaaacccgtcactgaaagagacaacgcacga
atgcttctgcatgaaatgatttcctactctgagtcttctgtatgtagaaaaaggcagtta
ttacactacttcggagaaaatctaagagaagactgtggatactgcgataactgcctaaac
cctaaggagcaatacgaaggacaaacatatgttgaaactgtgctgcaaacagcgcagcaa
actggtgaacgttttggtattcaacatctagtagcagtaattcgtggatctgaaaaccag
tacgtgcttagctacgatcataacaagctatctgtatacggaaaaggtaaagaggaaaat
gacttcttctggaactcagttgttcgccagactttgctttttgagtttctggaaaaagac
attgaaaacatcggttctttaaaacttactgataaaggacgagagtttatccttaaccct
cattcaatttccctttctaaagaccatgtgtacgaagacctgggtgaagaagaagagttt
gaaggaaacaatgcctccgctggtcataacggtggcagcaaatcttacgatcagtcttta
tttgacatccttaaaaagcttcgtaaagaagtaagtaaaaagaaaaatgttcctccttac
gtagttttccaggagccttctctggaagaaatggctaccacttacccaaccagtaaagac
gaactggctgccatcaatggtgtaggtatgggtaaagtgatgaagtttggagcgccgttt
attgaagctatcagcaagtatgttgaggaaaatgatattgtaacagctgctgacgtagtc
attaaatcagcagttaacaagtctaaaaacaaaatattcattatccagcagattgataag
aaggtagacctggaagagattgcagagtctcgctctatcagcatggatgagttattagat
gagattgaactgatctgctactctggcaccaagcttaagctagattattacattgatcag
atcttagatgaagatcaacaggatgacctttatgactactttcttagcgctgactccgat
agcatagaactggctttggaagagtttggaagtgattattcagaagaagaactaaggcta
atgcgtgttaagtttatgtcggaatacgcaaactaa
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