Porifericola rhodea: PZB74_18625
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Entry
PZB74_18625 CDS
T09201
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
prho
Porifericola rhodea
Pathway
prho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PZB74_18625 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prho03400
]
PZB74_18625 (xseA)
Enzymes [BR:
prho01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PZB74_18625 (xseA)
DNA repair and recombination proteins [BR:
prho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PZB74_18625 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
Apolipoprotein
Prominin
DIX
Motif
Other DBs
NCBI-ProteinID:
WKN30973
LinkDB
All DBs
Position
complement(4551863..4553206)
Genome browser
AA seq
447 aa
AA seq
DB search
MSHLSLLELNKIVKEALATQLEPTYWIVAEIGEMRLTQKGHCYLELVEKDNQYLLAKNRA
TIWSYAYRKISGWFEAITGESLKAGMSVLCQVEVAFHEVYGMSLNIKDIDANYTLGERAR
KKQEVLAQLAEEGVLEMNKGLQLPTVPQKIAVISSPTAAGLGDFLDQISKNRYRYQFNVK
LYKAIMQGQQAEQSIVDAMLRVFQKLESQAGAYDILVIIRGGGAQVDLDCFDCYDIAAHI
AQFPIPVVTGIGHERDETVADLVAHTRMKTPTAVAEFLINGALSFDEKLEELWYRISKRS
QTTLKEHHYALDNHAHHLRYSSGKKLQDEAHNLEQYSNRLQFYSKQQIRSHSEKLKGFKK
SLQSKMQTKFTTLQNKLTSYEKFLQASDPEQILKRGFTFTTVNGKPITDVKAINEGDQLS
TTTSESKILSRIESIQKRNNNESKKEN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagccacctttccttactggaactgaacaaaattgtaaaagaagcattagccactcaa
ttagagcccacttactggatagtagcagagataggagaaatgcggctgacccagaaaggg
cattgctatctggagctggttgaaaaagacaatcagtatctcttagccaaaaacagagcg
acaatctggagttatgcctatcgcaaaatcagcggttggtttgaggcaattactggtgaa
agccttaaggctggaatgagcgtcttgtgtcaggtagaagtagcctttcatgaggtttat
ggcatgagcctcaacatcaaagatatagatgctaattatacattaggagaaagggcccga
aagaagcaggaggtgcttgcgcaactggctgaggaaggtgtactggaaatgaacaaaggc
ttgcagctacctaccgtacctcaaaaaatagcagttatcagttcacctactgcggccggt
ttgggagattttctagaccagatctcaaaaaacagatatcgctatcagtttaatgtaaag
ctgtacaaagctatcatgcagggtcagcaggccgagcaaagtatagtagatgctatgcta
cgggtatttcagaagctggaaagccaggcaggtgcttatgatattttagtgattatcagg
ggaggaggtgcccaggtagatctggattgctttgactgttatgatattgccgcccacatt
gcacagtttcccattccggtagttacgggtattggtcacgagagggatgaaaccgtggca
gatttggtcgcacatactcgcatgaaaactcctaccgcagtagccgagtttctaattaat
ggtgccttaagttttgatgagaaattagaagagctatggtatagaatttctaaaagatca
cagactacccttaaggagcatcattatgcgttggataatcatgcccatcatttaaggtat
agttcaggtaaaaagcttcaggatgaggctcacaatctggaacagtacagcaatcgcctg
caattttacagcaagcaacagattaggtcccactcagagaagttaaagggttttaaaaaa
agtctacagtctaaaatgcaaaccaagtttaccactttgcaaaataaattgacgagctac
gaaaaatttttgcaggcttcagatcctgagcaaattctaaaaagaggctttacctttact
actgttaacggtaagccaattactgatgtcaaagctataaatgagggagatcaactaagc
acaactacttcagaaagtaaaatacttagcagaatagaaagtattcagaaaagaaataat
aatgagtccaaaaaagaaaactaa
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